RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 FOXA1P55317 472 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 ZFP36L1Q07352 338 aaKnown RBP3.84□□□□□ -1.8
ZEB1-212ENST00000558655 NAE1Q13564 534 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 CEACAM7Q14002 265 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 FASTKQ14296 549 aaKnown RBP3.84□□□□□ -1.8
ZEB1-212ENST00000558655 ZIC1Q15915 447 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 LPAL2Q16609 132 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 NRF1Q16656 503 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 XKR7Q5GH72 579 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 MANEAQ5SRI9 462 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 C6orf52Q5T4I8 152 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 TCEAL6Q6IPX3 200 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 KLHL24Q6TFL4 600 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 PCSK4Q6UW60 755 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 GPRIN3Q6ZVF9 776 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 MED25Q71SY5 747 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 TRIM46Q7Z4K8 759 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 ARHGAP22Q7Z5H3 698 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 NET1Q7Z628 596 aaPredicted RBP3.84□□□□□ -1.8
ZEB1-212ENST00000558655 SYVN1Q86TM6 617 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 SFTPA2Q8IWL1 248 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 DDIASQ8IXT1 998 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 CADM3Q8N126 398 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 EID2Q8N6I1 236 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 POGLUT1Q8NBL1 392 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 MFSD9Q8NBP5 474 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 PPFIBP2Q8ND30 876 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 BHLHE22Q8NFJ8 381 aaPredicted RBP3.84□□□□□ -1.8
ZEB1-212ENST00000558655 OR10G6Q8NH81 332 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 WDR20Q8TBZ3 569 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 THAP4Q8WY91 577 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 HPS1Q92902 700 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 TCEAL3Q969E4 200 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 TM4SF19Q96DZ7 209 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 SLC41A2Q96JW4 573 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 C3orf30Q96M34 536 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 DMRTA2Q96SC8 542 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 EGFL8Q99944 293 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 ZFYVE21Q9BQ24 234 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 ILKAPQ9H0C8 392 aaPredicted RBP3.84□□□□□ -1.8
ZEB1-212ENST00000558655 SRMSQ9H3Y6 488 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 FSCN3Q9NQT6 498 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 C1GALT1Q9NS00 363 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 ZFP57Q9NU63 452 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 TMEM140Q9NV12 185 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 TMEM45AQ9NWC5 275 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 ASIC5Q9NY37 505 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 MRPL15Q9P015 296 aaKnown RBP3.84□□□□□ -1.8
ZEB1-212ENST00000558655 LRIT1Q9P2V4 623 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 REV1Q9UBZ9 1251 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 FTSJ1Q9UET6 329 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 ZNF225Q9UK10 706 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 RNF24Q9Y225 148 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 LIPT1Q9Y234 373 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 BTBD3Q9Y2F9 522 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 DYRK1BQ9Y463 629 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 COPG1Q9Y678 874 aaKnown RBP3.84□□□□□ -1.8
ZEB1-212ENST00000558655 KCNE2Q9Y6J6 123 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 FLNBO75369 2602 aaKnown RBP3.84□□□□□ -1.8
ZEB1-212ENST00000558655 GON4LQ3T8J9 2241 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 ASXL3Q9C0F0 2248 aa3.84□□□□□ -1.8
ZEB1-212ENST00000558655 TPRP12270 2363 aaKnown RBP3.83□□□□□ -1.8
ZEB1-212ENST00000558655 PRAMEF33A0A0G2JMD5 474 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 SH3D21A4FU49 640 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 FITM1A5D6W6 292 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 H3BNX3 289 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 SUPT7LO94864 414 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 MFN2O95140 757 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 CLDN9O95484 217 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 TGFAP01135 160 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 LYNP07948 512 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 UROSP10746 265 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 CXCR2P25025 360 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 PTPN6P29350 595 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 CCKBRP32239 447 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 CSF2RBP32927 897 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 GRIA3P42263 894 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 CASP3P42574 277 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 CAPZA2P47755 286 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 MTNR1BP49286 362 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 RPL14P50914 215 aaKnown RBP3.83□□□□□ -1.8
ZEB1-212ENST00000558655 CCR8P51685 355 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 ERVPABLB-1P60509 514 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 CSNK1G2P78368 415 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 CAPRIN1Q14444 709 aaKnown RBP3.83□□□□□ -1.8
ZEB1-212ENST00000558655 KRT33BQ14525 404 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 C18orf21Q32NC0 220 aaPredicted RBP3.83□□□□□ -1.8
ZEB1-212ENST00000558655 TRMT5Q32P41 509 aaKnown RBP3.83□□□□□ -1.8
ZEB1-212ENST00000558655 ADPRMQ3LIE5 342 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 C3orf36Q3SXR2 165 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 DNAL1Q4LDG9 190 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 PAGE2BQ5JRK9 111 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 FAM69AQ5T7M9 428 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 DEPDC1Q5TB30 811 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 C6orf163Q5TEZ5 329 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 FCRL6Q6DN72 434 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 OR52E8Q6IFG1 317 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 TMEM71Q6P5X7 295 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 GALNT18Q6P9A2 607 aa3.83□□□□□ -1.8
ZEB1-212ENST00000558655 ZNF813Q6ZN06 617 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms