RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 ZBED6CLQ96FA7 236 aaPredicted RBP12.6□□□□□ -0.39
TMED3-205ENST00000558562 BBS4Q96RK4 519 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 MAPKAP1Q9BPZ7 522 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 SLC7A5P2Q9GIP4 190 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 GORASP2Q9H8Y8 452 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 NEUROD4Q9HD90 331 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 SLC35C2Q9NQQ7 365 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 ACSS1Q9NUB1 689 aaPredicted RBP12.6□□□□□ -0.39
TMED3-205ENST00000558562 ARMC1Q9NVT9 282 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 TAS2R7Q9NYW3 318 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 ITGB1BP2Q9UKP3 347 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 UTS2RQ9UKP6 389 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 C15orf41Q9Y2V0 281 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 ATG4BQ9Y4P1 393 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 MTORP42345 2549 aa12.59□□□□□ -0.39
TMED3-205ENST00000558562 DCHS2Q6V1P9 2916 aa12.59□□□□□ -0.39
TMED3-205ENST00000558562 C9J4A7 227 aa12.59□□□□□ -0.39
TMED3-205ENST00000558562 TIPRLO75663 272 aa12.59□□□□□ -0.39
TMED3-205ENST00000558562 KLF7O75840 302 aaPredicted RBP12.59□□□□□ -0.39
TMED3-205ENST00000558562 KRT75O95678 551 aa12.59□□□□□ -0.39
TMED3-205ENST00000558562 ALOX12P18054 663 aa12.59□□□□□ -0.39
TMED3-205ENST00000558562 PEX2P28328 305 aa12.59□□□□□ -0.39
TMED3-205ENST00000558562 BUD31P41223 144 aaPredicted RBP12.59□□□□□ -0.39
TMED3-205ENST00000558562 TNFRSF17Q02223 184 aa12.59□□□□□ -0.39
TMED3-205ENST00000558562 HSPB3Q12988 150 aa12.59□□□□□ -0.39
TMED3-205ENST00000558562 RGNQ15493 299 aa12.59□□□□□ -0.39
TMED3-205ENST00000558562 VMACQ2NL98 169 aa12.59□□□□□ -0.39
TMED3-205ENST00000558562 DEFB134Q4QY38 66 aa12.59□□□□□ -0.39
TMED3-205ENST00000558562 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.59□□□□□ -0.39
TMED3-205ENST00000558562 MLIPQ5VWP3 458 aa12.59□□□□□ -0.39
TMED3-205ENST00000558562 LPCAT4Q643R3 524 aa12.59□□□□□ -0.39
TMED3-205ENST00000558562 C18orf63Q68DL7 685 aa12.59□□□□□ -0.39
TMED3-205ENST00000558562 TMEM214Q6NUQ4 689 aaKnown RBP12.59□□□□□ -0.39
TMED3-205ENST00000558562 FAM180BQ6P0A1 224 aa12.59□□□□□ -0.39
TMED3-205ENST00000558562 FJX1Q86VR8 437 aa12.59□□□□□ -0.39
TMED3-205ENST00000558562 TMEM151BQ8IW70 566 aa12.59□□□□□ -0.39
TMED3-205ENST00000558562 OR52E4Q8NGH9 312 aa12.59□□□□□ -0.39
TMED3-205ENST00000558562 OR5AK3PQ8NH89 298 aa12.59□□□□□ -0.39
TMED3-205ENST00000558562 LRTOMTQ8WZ04 291 aa12.59□□□□□ -0.39
TMED3-205ENST00000558562 FER1L6-AS2Q96M78 137 aa12.59□□□□□ -0.39
TMED3-205ENST00000558562 CXorf36Q9H7Y0 433 aa12.59□□□□□ -0.39
TMED3-205ENST00000558562 FAM60AQ9NP50 221 aa12.59□□□□□ -0.39
TMED3-205ENST00000558562 GIMAP4Q9NUV9 329 aa12.59□□□□□ -0.39
TMED3-205ENST00000558562 MRPS2Q9Y399 296 aaKnown RBP12.59□□□□□ -0.39
TMED3-205ENST00000558562 SNX8Q9Y5X2 465 aa12.59□□□□□ -0.39
TMED3-205ENST00000558562 V9GYQ6 96 aa12.59□□□□□ -0.39
TMED3-205ENST00000558562 CNTRLQ7Z7A1 2325 aa12.59□□□□□ -0.39
TMED3-205ENST00000558562 GLOD5A6NK44 160 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 PEX12O00623 359 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 ZNF749O43361 778 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 PROM1O43490 865 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 ERAL1O75616 437 aaKnown RBP12.58□□□□□ -0.4
TMED3-205ENST00000558562 FCGR1AP12314 374 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 CPN2P22792 545 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 GPC1P35052 558 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 PCGF2P35227 344 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 CRATP43155 626 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 CDK9P50750 372 aaKnown RBP12.58□□□□□ -0.4
TMED3-205ENST00000558562 FADDQ13158 208 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 MLC1Q15049 377 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 GRAMD1BQ3KR37 738 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 SPDYE7PQ495Y7 208 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 GCNT6Q5T4J0 391 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 OGFRL1Q5TC84 451 aaPredicted RBP12.58□□□□□ -0.4
TMED3-205ENST00000558562 SLC48A1Q6P1K1 146 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 IZUMO2Q6UXV1 221 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 PTOV1Q86YD1 416 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 MCATQ8IVS2 390 aaKnown RBP12.58□□□□□ -0.4
TMED3-205ENST00000558562 DNAJC22Q8N4W6 341 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 CATSPER1Q8NEC5 780 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 FBXO30Q8TB52 745 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 FAM110BQ8TC76 370 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 GRHL3Q8TE85 626 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 DNAJC9Q8WXX5 260 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 TM9SF4Q92544 642 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 PPWD1Q96BP3 646 aaKnown RBP12.58□□□□□ -0.4
TMED3-205ENST00000558562 DPH2Q9BQC3 489 aaPredicted RBP12.58□□□□□ -0.4
TMED3-205ENST00000558562 KLHL4Q9C0H6 718 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 GLIPR2Q9H4G4 154 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 SIRT3Q9NTG7 399 aaPredicted RBP12.58□□□□□ -0.4
TMED3-205ENST00000558562 P4HTMQ9NXG6 502 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 PADI2Q9Y2J8 665 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 PTRH2Q9Y3E5 179 aaKnown RBP12.58□□□□□ -0.4
TMED3-205ENST00000558562 DTNAQ9Y4J8 743 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 FER1L5A0AVI2 2057 aa12.58□□□□□ -0.4
TMED3-205ENST00000558562 PKDREJQ9NTG1 2253 aa12.57□□□□□ -0.4
TMED3-205ENST00000558562 ZNF860A6NHJ4 632 aa12.57□□□□□ -0.4
TMED3-205ENST00000558562 MYO1GB0I1T2 1018 aa12.57□□□□□ -0.4
TMED3-205ENST00000558562 TXNDC9O14530 226 aa12.57□□□□□ -0.4
TMED3-205ENST00000558562 PGRMC2O15173 223 aa12.57□□□□□ -0.4
TMED3-205ENST00000558562 HCRTR1O43613 425 aa12.57□□□□□ -0.4
TMED3-205ENST00000558562 TPST1O60507 370 aa12.57□□□□□ -0.4
TMED3-205ENST00000558562 ETFAP13804 333 aa12.57□□□□□ -0.4
TMED3-205ENST00000558562 AGXTP21549 392 aa12.57□□□□□ -0.4
TMED3-205ENST00000558562 FASP25445 335 aa12.57□□□□□ -0.4
TMED3-205ENST00000558562 NCBP2P52298 156 aaKnown RBP eCLIP12.57□□□□□ -0.4
TMED3-205ENST00000558562 LIM2P55344 173 aa12.57□□□□□ -0.4
TMED3-205ENST00000558562 SNRPNP63162 240 aaKnown RBP12.57□□□□□ -0.4
TMED3-205ENST00000558562 CHRNB3Q05901 458 aa12.57□□□□□ -0.4
TMED3-205ENST00000558562 RUNX2Q13950 521 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms