RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 PRAMEF25A6NGN4 478 aa10.89□□□□□ -0.67
HERC1-202ENST00000558324 KDM4EB2RXH2 506 aaPredicted RBP10.89□□□□□ -0.67
HERC1-202ENST00000558324 ICOSLGO75144 302 aa10.89□□□□□ -0.67
HERC1-202ENST00000558324 CDH16O75309 829 aa10.89□□□□□ -0.67
HERC1-202ENST00000558324 ERN1O75460 977 aaKnown RBP10.89□□□□□ -0.67
HERC1-202ENST00000558324 HPNP05981 417 aa10.89□□□□□ -0.67
HERC1-202ENST00000558324 NAGAP17050 411 aa10.89□□□□□ -0.67
HERC1-202ENST00000558324 DDCP20711 480 aa10.89□□□□□ -0.67
HERC1-202ENST00000558324 DRD5P21918 477 aa10.89□□□□□ -0.67
HERC1-202ENST00000558324 MSX1P28360 303 aa10.89□□□□□ -0.67
HERC1-202ENST00000558324 PTPN6P29350 595 aa10.89□□□□□ -0.67
HERC1-202ENST00000558324 PTGDSP41222 190 aa10.89□□□□□ -0.67
HERC1-202ENST00000558324 NCBP2P52298 156 aaKnown RBP eCLIP10.89□□□□□ -0.67
HERC1-202ENST00000558324 DNAJB13P59910 316 aa10.89□□□□□ -0.67
HERC1-202ENST00000558324 DCAF7P61962 342 aa10.89□□□□□ -0.67
HERC1-202ENST00000558324 CRYZQ08257 329 aaKnown RBP10.89□□□□□ -0.67
HERC1-202ENST00000558324 PRSS53Q2L4Q9 553 aa10.89□□□□□ -0.67
HERC1-202ENST00000558324 DCST1Q5T197 706 aa10.89□□□□□ -0.67
HERC1-202ENST00000558324 LIPMQ5VYY2 423 aa10.89□□□□□ -0.67
HERC1-202ENST00000558324 TIGD3Q6B0B8 471 aa10.89□□□□□ -0.67
HERC1-202ENST00000558324 NPSR1Q6W5P4 371 aa10.89□□□□□ -0.67
HERC1-202ENST00000558324 NUP54Q7Z3B4 507 aa10.89□□□□□ -0.67
HERC1-202ENST00000558324 YRDCQ86U90 279 aaKnown RBP10.89□□□□□ -0.67
HERC1-202ENST00000558324 LIX1LQ8IVB5 337 aa10.89□□□□□ -0.67
HERC1-202ENST00000558324 C10orf107Q8IVU9 208 aa10.89□□□□□ -0.67
HERC1-202ENST00000558324 SAMD14Q8IZD0 417 aaPredicted RBP10.89□□□□□ -0.67
HERC1-202ENST00000558324 OR7G2Q8NG99 324 aa10.89□□□□□ -0.67
HERC1-202ENST00000558324 C11orf24Q96F05 449 aaPredicted RBP10.89□□□□□ -0.67
HERC1-202ENST00000558324 ADOQ96SZ5 270 aa10.89□□□□□ -0.67
HERC1-202ENST00000558324 TIMP4Q99727 224 aa10.89□□□□□ -0.67
HERC1-202ENST00000558324 IQCGQ9H095 443 aaKnown RBP10.89□□□□□ -0.67
HERC1-202ENST00000558324 UBQLN3Q9H347 655 aa10.89□□□□□ -0.67
HERC1-202ENST00000558324 ANKZF1Q9H8Y5 726 aa10.89□□□□□ -0.67
HERC1-202ENST00000558324 FOLH1BQ9HBA9 442 aa10.89□□□□□ -0.67
HERC1-202ENST00000558324 SERHLQ9NQF3 203 aa10.89□□□□□ -0.67
HERC1-202ENST00000558324 CAMK2AQ9UQM7 478 aa10.89□□□□□ -0.67
HERC1-202ENST00000558324 GPR55Q9Y2T6 319 aaPredicted RBP10.89□□□□□ -0.67
HERC1-202ENST00000558324 CACNA1CQ13936 2221 aa10.89□□□□□ -0.67
HERC1-202ENST00000558324 SNPHO15079 494 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 BCAS2O75934 225 aaPredicted RBP10.88□□□□□ -0.67
HERC1-202ENST00000558324 RSL1D1O76021 490 aaKnown RBP10.88□□□□□ -0.67
HERC1-202ENST00000558324 CT45A8P0DMV1 189 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 CT45A9P0DMV2 189 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 UROSP10746 265 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 TCEA1P23193 301 aaKnown RBP10.88□□□□□ -0.67
HERC1-202ENST00000558324 ELAVL4P26378 380 aaKnown RBP10.88□□□□□ -0.67
HERC1-202ENST00000558324 IL12BP29460 328 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 NTSP30990 170 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 MPIP34949 423 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 KRT20P35900 424 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 MC3RP41968 323 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 NAA20P61599 178 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 PCLAFQ15004 111 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 ACSF3Q4G176 576 aaPredicted RBP10.88□□□□□ -0.67
HERC1-202ENST00000558324 CT45A2Q5DJT8 189 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 SH2D4BQ5SQS7 431 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 FAM71E1Q6IPT2 247 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 SLC30A6Q6NXT4 461 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 TMEM107Q6UX40 140 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 SEM1Q6ZVN7 128 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 TRIM46Q7Z4K8 759 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 SLC44A2Q8IWA5 706 aaPredicted RBP10.88□□□□□ -0.67
HERC1-202ENST00000558324 ACBD4Q8NC06 268 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 FAM83FQ8NEG4 500 aaPredicted RBP10.88□□□□□ -0.67
HERC1-202ENST00000558324 OR4N2Q8NGD1 307 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 GFM2Q969S9 779 aaKnown RBP10.88□□□□□ -0.67
HERC1-202ENST00000558324 EFHD2Q96C19 240 aaPredicted RBP10.88□□□□□ -0.67
HERC1-202ENST00000558324 C14orf79Q96F83 325 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 APOPT1Q96IL0 206 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 VSTM2LQ96N03 204 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 COL21A1Q96P44 957 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 BTBD9Q96Q07 612 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 MYNNQ9NPC7 610 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 RRAGDQ9NQL2 400 aaPredicted RBP10.88□□□□□ -0.67
HERC1-202ENST00000558324 SIRT5Q9NXA8 310 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 MID2Q9UJV3 735 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 ITGB1BP2Q9UKP3 347 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 OR10H1Q9Y4A9 318 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 EXPH5Q8NEV8 1989 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 MYO9AB2RTY4 2548 aa10.88□□□□□ -0.67
HERC1-202ENST00000558324 CSMD2Q7Z408 3487 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 SERTM1A2A2V5 107 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 OR6C70A6NIJ9 312 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 MYO1GB0I1T2 1018 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 FAM47E-STBD1D6RA91 191 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 H3BQF6 201 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 TO15178 435 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 SPAG7O75391 227 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 SEC22BO75396 215 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 HOXD4P09016 255 aaPredicted RBP10.87□□□□□ -0.67
HERC1-202ENST00000558324 IGFBP2P18065 325 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 BMP7P18075 431 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 TACR1P25103 407 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 GSTM5P46439 218 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 VSNL1P62760 191 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 IFFO1Q0D2I5 559 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 MYBPHQ13203 477 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 SNTB1Q13884 538 aaKnown RBP10.87□□□□□ -0.67
HERC1-202ENST00000558324 CEBPEQ15744 281 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 RIPPLY2Q5TAB7 128 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms