RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 CBX7O95931 251 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 IGKV3-11P04433 115 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 S1PR1P21453 382 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 DRD5P21918 477 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 F8A1P23610 371 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 PTGER1P34995 402 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 PPICP45877 212 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 CRISP3P54108 245 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 RRADP55042 308 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 SLC37A1P57057 533 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 SLC26A5P58743 744 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 VMACQ2NL98 169 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 GTDC1Q4AE62 458 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 CYP27C1Q4G0S4 372 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 RABL3Q5HYI8 236 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.54□□□□□ -0.56
TPM1-209ENST00000558072 PLAG1Q6DJT9 500 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 FAAH2Q6GMR7 532 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 JMJD6Q6NYC1 403 aaPredicted RBP11.54□□□□□ -0.56
TPM1-209ENST00000558072 PGM2L1Q6PCE3 622 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 C16orf62Q7Z3J2 963 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 CALHM3Q86XJ0 350 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 PTRH1Q86Y79 214 aaKnown RBP11.54□□□□□ -0.56
TPM1-209ENST00000558072 MICU2Q8IYU8 434 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 TAGAPQ8N103 731 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 ZNF615Q8N8J6 731 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 ZSCAN1Q8NBB4 408 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 GOLM1Q8NBJ4 401 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 HIPK4Q8NE63 616 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 BHLHE22Q8NFJ8 381 aaPredicted RBP11.54□□□□□ -0.56
TPM1-209ENST00000558072 FBXO27Q8NI29 283 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 NUBPLQ8TB37 319 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 DOK4Q8TEW6 326 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 ZNF721Q8TF20 911 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 JADE3Q92613 823 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 HOXB13Q92826 284 aaPredicted RBP11.54□□□□□ -0.56
TPM1-209ENST00000558072 HSPBAP1Q96EW2 488 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 ZNF583Q96ND8 569 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 ZNF607Q96SK3 696 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 LMF2Q9BU23 707 aaKnown RBP11.54□□□□□ -0.56
TPM1-209ENST00000558072 TRIM4Q9C037 500 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 OR51I1Q9H343 314 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 MMP25Q9NPA2 562 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 ERVK-11Q9UQG0 969 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 SNX13Q9Y5W8 968 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 HS3ST3B1Q9Y662 390 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 NUP214P35658 2090 aaPredicted RBP11.54□□□□□ -0.56
TPM1-209ENST00000558072 SPTBN2O15020 2390 aa11.54□□□□□ -0.56
TPM1-209ENST00000558072 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 C2orf92A0A1B0GVN3 265 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 C1QTNF9BB2RNN3 333 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 TNFRSF21O75509 655 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 SERPINB7O75635 380 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 NKX2-2O95096 273 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 CT62P0C5K7 136 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 C1QTNF9P0C862 333 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 ARAFP10398 606 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 NR2F1P10589 423 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 OTX2P32243 289 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 TRHRP34981 398 aaPredicted RBP11.53□□□□□ -0.56
TPM1-209ENST00000558072 PCGF2P35227 344 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 KRT20P35900 424 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 GSK3BP49841 420 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 EMDP50402 254 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 CDK6Q00534 326 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 ZSWIM7Q19AV6 140 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 IRAK1BP1Q5VVH5 260 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 REEP3Q6NUK4 255 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 LANCL3Q6ZV70 420 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 GPR155Q7Z3F1 870 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 PATL1Q86TB9 770 aaKnown RBP11.53□□□□□ -0.56
TPM1-209ENST00000558072 IFNEQ86WN2 208 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 DHFR2Q86XF0 187 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 DND1Q8IYX4 353 aaKnown RBP11.53□□□□□ -0.56
TPM1-209ENST00000558072 EID3Q8N140 333 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 KIF2BQ8N4N8 673 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 SLC15A4Q8N697 577 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 COX18Q8N8Q8 333 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 OR11G2Q8NGC1 345 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 OR52E4Q8NGH9 312 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 C16orf52Q8NHV5 167 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 BBS10Q8TAM1 723 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 GPR151Q8TDV0 419 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 KCNE4Q8WWG9 221 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 XAGE5Q8WWM1 108 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 SLC9A6Q92581 669 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 GIMAP5Q96F15 307 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 AURKBQ96GD4 344 aaPredicted RBP11.53□□□□□ -0.56
TPM1-209ENST00000558072 LCORQ96JN0 433 aaPredicted RBP11.53□□□□□ -0.56
TPM1-209ENST00000558072 BTBD9Q96Q07 612 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 TRNT1Q96Q11 434 aaKnown RBP11.53□□□□□ -0.56
TPM1-209ENST00000558072 OR7D2Q96RA2 312 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 BTBD2Q9BX70 525 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 DEFB126Q9BYW3 111 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 ARMC7Q9H6L4 198 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 EVA1AQ9H8M9 152 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 GORASP2Q9H8Y8 452 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 FOLH1BQ9HBA9 442 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 EQTNQ9NQ60 294 aa11.53□□□□□ -0.56
TPM1-209ENST00000558072 SLC6A13Q9NSD5 602 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms