RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 TMEM184BQ9Y519 407 aaPredicted RBP6.9□□□□□ -1.3
SPG11-204ENST00000557866 CLDN16Q9Y5I7 305 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 MN1Q10571 1320 aaPredicted RBP6.9□□□□□ -1.3
SPG11-204ENST00000557866 SDK1Q7Z5N4 2213 aa6.9□□□□□ -1.3
SPG11-204ENST00000557866 LAMA1P25391 3075 aa6.9□□□□□ -1.31
SPG11-204ENST00000557866 EML5Q05BV3 1969 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 CROCCQ5TZA2 2017 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 G3V2T6 193 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 SIGLEC6O43699 453 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 DUX1O43812 170 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 SLC28A2O43868 658 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 DPM1O60762 260 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 NSA2O95478 260 aaKnown RBP6.89□□□□□ -1.31
SPG11-204ENST00000557866 SNAP29O95721 258 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 ALPLP05186 524 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 HMGN2P05204 90 aaKnown RBP6.89□□□□□ -1.31
SPG11-204ENST00000557866 FABP3P05413 133 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 LYNP07948 512 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 CT62P0C5K7 136 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 FOLR1P15328 257 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 PORP16435 677 aaPredicted RBP6.89□□□□□ -1.31
SPG11-204ENST00000557866 HOXB6P17509 224 aaKnown RBP6.89□□□□□ -1.31
SPG11-204ENST00000557866 RAB6AP20340 208 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 PRKACGP22612 351 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 MAGEA8P43361 318 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 OR1E2P47887 323 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 PPM1FP49593 454 aaPredicted RBP6.89□□□□□ -1.31
SPG11-204ENST00000557866 SEPHS1P49903 392 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 KHKP50053 298 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 ALDH3A2P51648 485 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 CLCN2P51788 898 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 ARSFP54793 590 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 TXNL4AP83876 142 aaKnown RBP6.89□□□□□ -1.31
SPG11-204ENST00000557866 PPP2R2BQ00005 443 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 MYBPC1Q00872 1141 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 DUSP8Q13202 625 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 MED21Q13503 144 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 BLMHQ13867 455 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 FAM53BQ14153 422 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 ERV3-1Q14264 604 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 PUM1Q14671 1186 aaKnown RBP eCLIP6.89□□□□□ -1.31
SPG11-204ENST00000557866 NR0B2Q15466 257 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 DUSP7Q16829 419 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 SYT16Q17RD7 645 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 MSMPQ1L6U9 139 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 IFI44LQ53G44 452 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 TRMT12Q53H54 448 aaKnown RBP6.89□□□□□ -1.31
SPG11-204ENST00000557866 SNAP47Q5SQN1 464 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 PRAMEF17Q5VTA0 474 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 GARNL3Q5VVW2 1013 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 OR2T5Q6IEZ7 315 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 SHQ1Q6PI26 577 aaKnown RBP6.89□□□□□ -1.31
SPG11-204ENST00000557866 ZNF574Q6ZN55 896 aaPredicted RBP6.89□□□□□ -1.31
SPG11-204ENST00000557866 SZRD1Q7Z422 152 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 PRSS42Q7Z5A4 293 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 WDR53Q7Z5U6 358 aaPredicted RBP6.89□□□□□ -1.31
SPG11-204ENST00000557866 PATL1Q86TB9 770 aaKnown RBP6.89□□□□□ -1.31
SPG11-204ENST00000557866 STK32CQ86UX6 486 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 SAMD14Q8IZD0 417 aaPredicted RBP6.89□□□□□ -1.31
SPG11-204ENST00000557866 LGI4Q8N135 537 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 CARFQ8N187 725 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 OR2L13Q8N349 312 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 D2HGDHQ8N465 521 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 METTL27Q8N6F8 245 aaPredicted RBP6.89□□□□□ -1.31
SPG11-204ENST00000557866 OR4D11Q8NGI4 311 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 OR2T29Q8NH02 315 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 OR4C6Q8NH72 309 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 MAGEE2Q8TD90 523 aaPredicted RBP6.89□□□□□ -1.31
SPG11-204ENST00000557866 TANKQ92844 425 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 MOAP1Q96BY2 351 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 SLC35A4Q96G79 324 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 AHCYL2Q96HN2 611 aaKnown RBP6.89□□□□□ -1.31
SPG11-204ENST00000557866 SLC41A2Q96JW4 573 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 CNBD2Q96M20 576 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 OR7D2Q96RA2 312 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 MBOAT4Q96T53 435 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 TREX2Q9BQ50 279 aaPredicted RBP6.89□□□□□ -1.31
SPG11-204ENST00000557866 WFDC6Q9BQY6 131 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 ADI1Q9BV57 179 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 OSBPL10Q9BXB5 764 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 EPB41L1Q9H4G0 881 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 SOHLH2Q9NX45 425 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 ADPRHL2Q9NX46 363 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 USE1Q9NZ43 259 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 HCN3Q9P1Z3 774 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 P2RX2Q9UBL9 471 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 TRPC4Q9UBN4 977 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 FBXO4Q9UKT5 387 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 PADI2Q9Y2J8 665 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 U3KQV3 271 aa6.89□□□□□ -1.31
SPG11-204ENST00000557866 TDRD6O60522 2096 aaKnown RBP6.89□□□□□ -1.31
SPG11-204ENST00000557866 A0A1W2PQM1 296 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 MAGEA13PA6NCF6 341 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 OR2W5A6NFC9 320 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 A8MU76 341 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 C5orf58C9J3I9 102 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 J3KTA2 159 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 GNGT2O14610 69 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 PCDHGA12O60330 932 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 SEMA7AO75326 666 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms