RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 ZC3HAV1LQ96H79 300 aaKnown RBP16.56■□□□□ 0.24
ABCD4-228ENST00000557588 LCORQ96JN0 433 aaPredicted RBP16.56■□□□□ 0.24
ABCD4-228ENST00000557588 ATOH8Q96SQ7 321 aa16.56■□□□□ 0.24
ABCD4-228ENST00000557588 OSBPL9Q96SU4 736 aa16.56■□□□□ 0.24
ABCD4-228ENST00000557588 ALG9Q9H6U8 611 aa16.56■□□□□ 0.24
ABCD4-228ENST00000557588 PSD3Q9NYI0 1048 aa16.56■□□□□ 0.24
ABCD4-228ENST00000557588 EHD3Q9NZN3 535 aa16.56■□□□□ 0.24
ABCD4-228ENST00000557588 FBXL2Q9UKC9 423 aa16.56■□□□□ 0.24
ABCD4-228ENST00000557588 CR1P17927 2039 aa16.55■□□□□ 0.24
ABCD4-228ENST00000557588 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.55■□□□□ 0.24
ABCD4-228ENST00000557588 SUPT3HB4E1H0 165 aa16.55■□□□□ 0.24
ABCD4-228ENST00000557588 EMC8O43402 210 aa16.55■□□□□ 0.24
ABCD4-228ENST00000557588 KERAO60938 352 aa16.55■□□□□ 0.24
ABCD4-228ENST00000557588 SUPT3HO75486 399 aa16.55■□□□□ 0.24
ABCD4-228ENST00000557588 SEMA3DO95025 777 aa16.55■□□□□ 0.24
ABCD4-228ENST00000557588 IFNA2P01563 188 aa16.55■□□□□ 0.24
ABCD4-228ENST00000557588 GBAP04062 536 aa16.55■□□□□ 0.24
ABCD4-228ENST00000557588 C8BP07358 591 aa16.55■□□□□ 0.24
ABCD4-228ENST00000557588 XKP51811 444 aa16.55■□□□□ 0.24
ABCD4-228ENST00000557588 RAB10P61026 200 aa16.55■□□□□ 0.24
ABCD4-228ENST00000557588 MGAT2Q10469 447 aa16.55■□□□□ 0.24
ABCD4-228ENST00000557588 PDIA2Q13087 525 aaKnown RBP16.55■□□□□ 0.24
ABCD4-228ENST00000557588 FGFBP1Q14512 234 aa16.55■□□□□ 0.24
ABCD4-228ENST00000557588 PRICKLE4Q2TBC4 344 aa16.55■□□□□ 0.24
ABCD4-228ENST00000557588 BEX5Q5H9J7 111 aa16.55■□□□□ 0.24
ABCD4-228ENST00000557588 ZNF704Q6ZNC4 412 aaPredicted RBP16.55■□□□□ 0.24
ABCD4-228ENST00000557588 ISCA2Q86U28 154 aa16.55■□□□□ 0.24
ABCD4-228ENST00000557588 GBP7Q8N8V2 638 aaPredicted RBP16.55■□□□□ 0.24
ABCD4-228ENST00000557588 TMEM158Q8WZ71 300 aa16.55■□□□□ 0.24
ABCD4-228ENST00000557588 ZNF845Q96IR2 970 aaPredicted RBP16.55■□□□□ 0.24
ABCD4-228ENST00000557588 RBBP8Q99708 897 aa16.55■□□□□ 0.24
ABCD4-228ENST00000557588 ABCA1O95477 2261 aa16.55■□□□□ 0.24
ABCD4-228ENST00000557588 OR6C70A6NIJ9 312 aa16.54■□□□□ 0.24
ABCD4-228ENST00000557588 UBXN8O00124 270 aa16.54■□□□□ 0.24
ABCD4-228ENST00000557588 TO15178 435 aa16.54■□□□□ 0.24
ABCD4-228ENST00000557588 TP73O15350 636 aa16.54■□□□□ 0.24
ABCD4-228ENST00000557588 UGDHO60701 494 aa16.54■□□□□ 0.24
ABCD4-228ENST00000557588 KCNJ5P48544 419 aa16.54■□□□□ 0.24
ABCD4-228ENST00000557588 B3GALT5-AS1P59052 145 aa16.54■□□□□ 0.24
ABCD4-228ENST00000557588 SIRPAP78324 504 aa16.54■□□□□ 0.24
ABCD4-228ENST00000557588 GUSBP1Q15486 140 aa16.54■□□□□ 0.24
ABCD4-228ENST00000557588 TEX9Q8N6V9 391 aa16.54■□□□□ 0.24
ABCD4-228ENST00000557588 ZNF611Q8N823 705 aa16.54■□□□□ 0.24
ABCD4-228ENST00000557588 FIG4Q92562 907 aa16.54■□□□□ 0.24
ABCD4-228ENST00000557588 LRRC1Q9BTT6 524 aa16.54■□□□□ 0.24
ABCD4-228ENST00000557588 RNF122Q9H9V4 155 aa16.54■□□□□ 0.24
ABCD4-228ENST00000557588 MAT2BQ9NZL9 334 aa16.54■□□□□ 0.24
ABCD4-228ENST00000557588 ZNF639Q9UID6 485 aa16.54■□□□□ 0.24
ABCD4-228ENST00000557588 DKKL1Q9UK85 242 aa16.54■□□□□ 0.24
ABCD4-228ENST00000557588 PPP2R2CQ9Y2T4 447 aa16.54■□□□□ 0.24
ABCD4-228ENST00000557588 FRG2CA6NGY1 282 aa16.53■□□□□ 0.24
ABCD4-228ENST00000557588 B4DXG7 233 aa16.53■□□□□ 0.24
ABCD4-228ENST00000557588 FOXE1O00358 373 aaPredicted RBP16.53■□□□□ 0.24
ABCD4-228ENST00000557588 KLF4O43474 513 aa16.53■□□□□ 0.24
ABCD4-228ENST00000557588 TLX2O43763 284 aaPredicted RBP16.53■□□□□ 0.24
ABCD4-228ENST00000557588 SEC31AO94979 1220 aaKnown RBP16.53■□□□□ 0.24
ABCD4-228ENST00000557588 ATP1B1P05026 303 aa16.53■□□□□ 0.24
ABCD4-228ENST00000557588 THBDP07204 575 aa16.53■□□□□ 0.24
ABCD4-228ENST00000557588 PORP16435 677 aaPredicted RBP16.53■□□□□ 0.24
ABCD4-228ENST00000557588 DRD5P21918 477 aa16.53■□□□□ 0.24
ABCD4-228ENST00000557588 MAP4K2Q12851 820 aa16.53■□□□□ 0.24
ABCD4-228ENST00000557588 EXOSC7Q15024 291 aaKnown RBP16.53■□□□□ 0.24
ABCD4-228ENST00000557588 ETFDHQ16134 617 aa16.53■□□□□ 0.24
ABCD4-228ENST00000557588 SH2D5Q6ZV89 423 aa16.53■□□□□ 0.24
ABCD4-228ENST00000557588 CHMP1BQ7LBR1 199 aa16.53■□□□□ 0.24
ABCD4-228ENST00000557588 MILR1Q7Z6M3 343 aa16.53■□□□□ 0.24
ABCD4-228ENST00000557588 GAS2L3Q86XJ1 694 aa16.53■□□□□ 0.24
ABCD4-228ENST00000557588 HIPK1Q86Z02 1210 aa16.53■□□□□ 0.24
ABCD4-228ENST00000557588 WDR20Q8TBZ3 569 aa16.53■□□□□ 0.24
ABCD4-228ENST00000557588 RNF138Q8WVD3 245 aa16.53■□□□□ 0.24
ABCD4-228ENST00000557588 TMCO6Q96DC7 493 aa16.53■□□□□ 0.24
ABCD4-228ENST00000557588 SLC35A4Q96G79 324 aa16.53■□□□□ 0.24
ABCD4-228ENST00000557588 COL21A1Q96P44 957 aa16.53■□□□□ 0.24
ABCD4-228ENST00000557588 CPNE1Q99829 537 aa16.53■□□□□ 0.24
ABCD4-228ENST00000557588 TMEM204Q9BSN7 226 aa16.53■□□□□ 0.24
ABCD4-228ENST00000557588 TXNDC16Q9P2K2 825 aa16.53■□□□□ 0.24
ABCD4-228ENST00000557588 BCAP29Q9UHQ4 241 aa16.53■□□□□ 0.24
ABCD4-228ENST00000557588 PLLPQ9Y342 182 aa16.53■□□□□ 0.24
ABCD4-228ENST00000557588 EFCAB8A8MWE9 144 aa16.52■□□□□ 0.24
ABCD4-228ENST00000557588 CXorf49A8MYA2 514 aaPredicted RBP16.52■□□□□ 0.24
ABCD4-228ENST00000557588 RNF223E7ERA6 249 aa16.52■□□□□ 0.24
ABCD4-228ENST00000557588 HS3ST1O14792 307 aa16.52■□□□□ 0.24
ABCD4-228ENST00000557588 ZIC3O60481 467 aa16.52■□□□□ 0.24
ABCD4-228ENST00000557588 ABCB7O75027 752 aa16.52■□□□□ 0.24
ABCD4-228ENST00000557588 CBX7O95931 251 aa16.52■□□□□ 0.24
ABCD4-228ENST00000557588 F12P00748 615 aaPredicted RBP16.52■□□□□ 0.24
ABCD4-228ENST00000557588 PEPDP12955 493 aa16.52■□□□□ 0.24
ABCD4-228ENST00000557588 MTHFD2P13995 350 aa16.52■□□□□ 0.24
ABCD4-228ENST00000557588 PPP3CBP16298 524 aa16.52■□□□□ 0.24
ABCD4-228ENST00000557588 PPICP45877 212 aa16.52■□□□□ 0.24
ABCD4-228ENST00000557588 NR1H2P55055 460 aa16.52■□□□□ 0.24
ABCD4-228ENST00000557588 DLG1Q12959 904 aa16.52■□□□□ 0.24
ABCD4-228ENST00000557588 VEZF1Q14119 521 aa16.52■□□□□ 0.24
ABCD4-228ENST00000557588 CPSF6Q16630 551 aaKnown RBP eCLIP16.52■□□□□ 0.24
ABCD4-228ENST00000557588 CLEC12BQ2HXU8 276 aa16.52■□□□□ 0.24
ABCD4-228ENST00000557588 FAM111BQ6SJ93 734 aa16.52■□□□□ 0.24
ABCD4-228ENST00000557588 ZNF610Q8N9Z0 462 aa16.52■□□□□ 0.24
ABCD4-228ENST00000557588 MAPK1IP1LQ8NDC0 245 aa16.52■□□□□ 0.24
ABCD4-228ENST00000557588 BRINP2Q9C0B6 783 aa16.52■□□□□ 0.24
ABCD4-228ENST00000557588 NMRAL1Q9HBL8 299 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms