RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 KIF21AQ7Z4S6 1674 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 AFF2P51816 1311 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 FAM47DPA6NHR8 397 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 WASHC1A8K0Z3 465 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 NEDD8-MDP1E9PL57 170 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 NPIPB9F8W1W9 429 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 P2RY10O00398 339 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 PRRG1O14668 218 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 IMPA2O14732 288 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 CTAGE5O15320 804 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 ZSCAN12O43309 604 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 MAGEC1O60732 1142 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 B4GALT2O60909 372 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 DUSP11O75319 330 aaKnown RBP2.69□□□□□ -1.98
TRAV28-201ENST00000557548 KHDRBS3O75525 346 aaKnown RBP2.69□□□□□ -1.98
TRAV28-201ENST00000557548 MTRF1O75570 445 aaKnown RBP2.69□□□□□ -1.98
TRAV28-201ENST00000557548 AP2A2O94973 939 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 SERPINA3P01011 423 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 IGHEP01854 428 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 PRSS1P07477 247 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 T-ENOLP0DO92 83 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 UQCRBP14927 111 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 CPN1P15169 458 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 SELEP16581 610 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 CD9P21926 228 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 ZFP36L2P47974 494 aaKnown RBP2.69□□□□□ -1.98
TRAV28-201ENST00000557548 THBS3P49746 956 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 PPT1P50897 306 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 LINC01547P58512 204 aaPredicted RBP2.69□□□□□ -1.98
TRAV28-201ENST00000557548 RPS27AP62979 156 aaKnown RBP2.69□□□□□ -1.98
TRAV28-201ENST00000557548 HYAL1Q12794 435 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 ZP4Q12836 540 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 ITPK1Q13572 414 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 ENPP2Q13822 863 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 TFDP1Q14186 410 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 MXD4Q14582 209 aaPredicted RBP2.69□□□□□ -1.98
TRAV28-201ENST00000557548 RBBP5Q15291 538 aaKnown RBP2.69□□□□□ -1.98
TRAV28-201ENST00000557548 TATDN3Q17R31 274 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 SGSM1Q2NKQ1 1148 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 ZNF585BQ52M93 769 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 BEND6Q5SZJ8 279 aaPredicted RBP2.69□□□□□ -1.98
TRAV28-201ENST00000557548 TPGS2Q68CL5 300 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 ZNF562Q6V9R5 426 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 TAS2R42Q7RTR8 314 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 NET1Q7Z628 596 aaPredicted RBP2.69□□□□□ -1.98
TRAV28-201ENST00000557548 CATSPERDQ86XM0 798 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 SLC22A9Q8IVM8 553 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 SPEM1Q8N4L4 309 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 RFLNBQ8N5W9 214 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 ANKFN1Q8N957 763 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 BHLHE23Q8NDY6 225 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 AKR7LQ8NHP1 331 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 TRMT10AQ8TBZ6 339 aaKnown RBP2.69□□□□□ -1.98
TRAV28-201ENST00000557548 FBXO25Q8TCJ0 367 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 SPRYD4Q8WW59 207 aaPredicted RBP2.69□□□□□ -1.98
TRAV28-201ENST00000557548 UPRTQ96BW1 309 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 ZNF524Q96C55 264 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 SLC41A3Q96GZ6 507 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 AKR1E2Q96JD6 320 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 AGAP3Q96P47 875 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 NPAS2Q99743 824 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 CRNKL1Q9BZJ0 848 aaKnown RBP2.69□□□□□ -1.98
TRAV28-201ENST00000557548 HOXD1Q9GZZ0 328 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 MAGT1Q9H0U3 335 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 STMN4Q9H169 189 aaPredicted RBP2.69□□□□□ -1.98
TRAV28-201ENST00000557548 HIPK2Q9H2X6 1198 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 NMUR1Q9HB89 426 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 ZNF334Q9HCZ1 680 aaPredicted RBP2.69□□□□□ -1.98
TRAV28-201ENST00000557548 RAB18Q9NP72 206 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 FAM114A2Q9NRY5 505 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 C2orf42Q9NWW7 574 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 EIF3KQ9UBQ5 218 aaKnown RBP2.69□□□□□ -1.98
TRAV28-201ENST00000557548 GHRLQ9UBU3 117 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 TUBGCP4Q9UGJ1 667 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 LNPEPQ9UIQ6 1025 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 PPP1R3CQ9UQK1 317 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 NIP7Q9Y221 180 aaKnown RBP eCLIP2.69□□□□□ -1.98
TRAV28-201ENST00000557548 SLC9A8Q9Y2E8 581 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 NSD2O96028 1365 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 CCDC7Q96M83 1385 aa2.69□□□□□ -1.98
TRAV28-201ENST00000557548 TTC21BQ7Z4L5 1316 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 LOC105371242A0A075B767 164 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 A0A087WW49 117 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 PPIAL4CA0A0B4J2A2 164 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 A0A0J9YVX5 310 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 A0A1B0GUV1 79 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 LRIT2A6NDA9 550 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 METTL21EPA6NDL7 271 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 FBLL1A6NHQ2 334 aaKnown RBP2.68□□□□□ -1.98
TRAV28-201ENST00000557548 C15orf61A6NNL5 157 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 ZNF724A8MTY0 619 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 L7N2F9 121 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 CYB561D2O14569 222 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 EI24O14681 340 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 INPP4BO15327 924 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 TNFSF12O43508 249 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 RANBP6O60518 1105 aaKnown RBP2.68□□□□□ -1.98
TRAV28-201ENST00000557548 ERLIN1O75477 346 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 STAMBPO95630 424 aa2.68□□□□□ -1.98
TRAV28-201ENST00000557548 CLDN1O95832 211 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms