RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 RPN2P04844 631 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 NTSP30990 170 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 TRHRP34981 398 aaPredicted RBP16.66■□□□□ 0.26
XRCC3-218ENST00000557439 GAS1P54826 345 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 PSPHP78330 225 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 IFITM2Q01629 132 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 SLC9A5Q14940 896 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 OCLNQ16625 522 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 ABI3BPQ7Z7G0 1075 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 MS4A6EQ96DS6 147 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 POLDIP3Q9BY77 421 aaKnown RBP16.66■□□□□ 0.26
XRCC3-218ENST00000557439 MIXL1Q9H2W2 232 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 SEMA4GQ9NTN9 838 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 ASB4Q9Y574 426 aa16.66■□□□□ 0.26
XRCC3-218ENST00000557439 A0A1W2PQ09 198 aa16.65■□□□□ 0.26
XRCC3-218ENST00000557439 FCMRO60667 390 aa16.65■□□□□ 0.26
XRCC3-218ENST00000557439 RAB36O95755 333 aa16.65■□□□□ 0.26
XRCC3-218ENST00000557439 LALBAP00709 142 aa16.65■□□□□ 0.26
XRCC3-218ENST00000557439 TAS2R41P59536 307 aa16.65■□□□□ 0.26
XRCC3-218ENST00000557439 MLLT11Q13015 90 aaPredicted RBP16.65■□□□□ 0.26
XRCC3-218ENST00000557439 KIAA1161Q6NSJ0 714 aa16.65■□□□□ 0.26
XRCC3-218ENST00000557439 SLC30A6Q6NXT4 461 aa16.65■□□□□ 0.26
XRCC3-218ENST00000557439 FAM26EQ8N5C1 309 aa16.65■□□□□ 0.26
XRCC3-218ENST00000557439 OR52E1Q8NGJ3 308 aa16.65■□□□□ 0.26
XRCC3-218ENST00000557439 C1GALT1C1Q96EU7 318 aa16.65■□□□□ 0.26
XRCC3-218ENST00000557439 RNFT2Q96EX2 444 aa16.65■□□□□ 0.26
XRCC3-218ENST00000557439 DMRTB1Q96MA1 342 aa16.65■□□□□ 0.26
XRCC3-218ENST00000557439 PHOX2BQ99453 314 aa16.65■□□□□ 0.26
XRCC3-218ENST00000557439 SAP130Q9H0E3 1048 aa16.65■□□□□ 0.26
XRCC3-218ENST00000557439 MRPS30Q9NP92 439 aaKnown RBP16.65■□□□□ 0.26
XRCC3-218ENST00000557439 PRDM7Q9NQW5 492 aa16.65■□□□□ 0.26
XRCC3-218ENST00000557439 TESQ9UGI8 421 aaKnown RBP16.65■□□□□ 0.26
XRCC3-218ENST00000557439 ZFR2Q9UPR6 939 aaKnown RBP16.65■□□□□ 0.26
XRCC3-218ENST00000557439 CHST2Q9Y4C5 530 aa16.65■□□□□ 0.26
XRCC3-218ENST00000557439 ZIC2O95409 532 aaPredicted RBP16.65■□□□□ 0.26
XRCC3-218ENST00000557439 ENDOUP21128 410 aaKnown RBP16.65■□□□□ 0.26
XRCC3-218ENST00000557439 PEBP1P30086 187 aaKnown RBP16.65■□□□□ 0.26
XRCC3-218ENST00000557439 KHKP50053 298 aa16.65■□□□□ 0.26
XRCC3-218ENST00000557439 CDK5Q00535 292 aa16.65■□□□□ 0.26
XRCC3-218ENST00000557439 C1DQ13901 141 aaKnown RBP16.65■□□□□ 0.26
XRCC3-218ENST00000557439 TANGO2Q6ICL3 276 aa16.65■□□□□ 0.26
XRCC3-218ENST00000557439 C1orf94Q6P1W5 598 aa16.65■□□□□ 0.26
XRCC3-218ENST00000557439 HDDC3Q8N4P3 179 aa16.65■□□□□ 0.26
XRCC3-218ENST00000557439 RASSF5Q8WWW0 418 aa16.65■□□□□ 0.26
XRCC3-218ENST00000557439 FGF11Q92914 225 aa16.65■□□□□ 0.26
XRCC3-218ENST00000557439 GPSM3Q9Y4H4 160 aa16.65■□□□□ 0.26
XRCC3-218ENST00000557439 C2orf16Q68DN1 1984 aa16.64■□□□□ 0.26
XRCC3-218ENST00000557439 FAM170BA6NMN3 283 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 GRXCR1A8MXD5 290 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 CLEC3AO75596 197 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 IL7P13232 177 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 HIST1H1TP22492 207 aaPredicted RBP16.64■□□□□ 0.25
XRCC3-218ENST00000557439 TCEA1P23193 301 aaKnown RBP16.64■□□□□ 0.25
XRCC3-218ENST00000557439 TIE1P35590 1138 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 GPR4P46093 362 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 RAB28P51157 221 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 ZNF311Q5JNZ3 666 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 ARMC4Q5T2S8 1044 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 AGAP6Q5VW22 663 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 TYW3Q6IPR3 259 aaKnown RBP16.64■□□□□ 0.25
XRCC3-218ENST00000557439 PSRC1Q6PGN9 363 aaPredicted RBP16.64■□□□□ 0.25
XRCC3-218ENST00000557439 NKAIN4Q8IVV8 208 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 SCAIQ8N9R8 606 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 OR4F15Q8NGB8 312 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 PRRC1Q96M27 445 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 AGAP4Q96P64 663 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 HDAC8Q9BY41 377 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 MALT1Q9UDY8 824 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 APOBEC3BQ9UH17 382 aaKnown RBP16.64■□□□□ 0.25
XRCC3-218ENST00000557439 DIMT1Q9UNQ2 313 aaKnown RBP16.64■□□□□ 0.25
XRCC3-218ENST00000557439 TRBV23OR9-2A0A075B6M9 112 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 A0A1W2PQL4 384 aaPredicted RBP16.64■□□□□ 0.25
XRCC3-218ENST00000557439 PIP5K1CO60331 668 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 TSPAN19P0C672 248 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 ATP5A1P25705 553 aaKnown RBP16.64■□□□□ 0.25
XRCC3-218ENST00000557439 SMIM11AP58511 58 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 RUNX1T1Q06455 604 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 C2orf27AQ580R0 203 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 ABHD17CQ6PCB6 329 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 FAM131AQ6UXB0 335 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 KCT2Q8NC54 265 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 COL26A1Q96A83 441 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 OR7D2Q96RA2 312 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 SRRQ9GZT4 340 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 PCBD2Q9H0N5 130 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 TP63Q9H3D4 680 aaPredicted RBP16.64■□□□□ 0.25
XRCC3-218ENST00000557439 C3orf14Q9HBI5 128 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 NEK6Q9HC98 313 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 TAS2R7Q9NYW3 318 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 PLEKHB1Q9UF11 243 aaPredicted RBP16.64■□□□□ 0.25
XRCC3-218ENST00000557439 CMAHPQ9Y471 501 aa16.64■□□□□ 0.25
XRCC3-218ENST00000557439 NCR1O76036 304 aa16.63■□□□□ 0.25
XRCC3-218ENST00000557439 SLC2A10O95528 541 aa16.63■□□□□ 0.25
XRCC3-218ENST00000557439 CSF2P04141 144 aa16.63■□□□□ 0.25
XRCC3-218ENST00000557439 GNSP15586 552 aa16.63■□□□□ 0.25
XRCC3-218ENST00000557439 CST6Q15828 149 aa16.63■□□□□ 0.25
XRCC3-218ENST00000557439 CRTC2Q53ET0 693 aaPredicted RBP16.63■□□□□ 0.25
XRCC3-218ENST00000557439 C6orf132Q5T0Z8 1188 aa16.63■□□□□ 0.25
XRCC3-218ENST00000557439 FAM92BQ6ZTR7 304 aa16.63■□□□□ 0.25
XRCC3-218ENST00000557439 OR4N5Q8IXE1 308 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms