RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 DTYMKP23919 212 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 UBE2NLQ5JXB2 153 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 EPHA10Q5JZY3 1008 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 C9orf57Q5W0N0 161 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 OR6N2Q8NGY6 317 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 ZCCHC4Q9H5U6 513 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 ACSL6Q9UKU0 697 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 A6NLC8 198 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 CA12O43570 354 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 PSMD8P48556 350 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 FAM69BQ5VUD6 431 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 OR4K15Q8NH41 348 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 ZNF597Q96LX8 424 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 RYDENQ9NUL5 291 aaKnown RBP8.45□□□□□ -1.06
SYNE3-205ENST00000557275 TAS2R16Q9NYV7 291 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 LOC102725191A0A1B0GVB3 256 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 PPP3CBP16298 524 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 MTNR1AP48039 350 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 GKN2Q86XP6 184 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 KLHDC8BQ8IXV7 354 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 SAP130Q9H0E3 1048 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 SLCO5A1Q9H2Y9 848 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 CUTCQ9NTM9 273 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 UPK1BO75841 260 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 F10P00742 488 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 RAB40ALP0C0E4 278 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 ARP10275 920 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 UBL4AP11441 157 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 PBX2P40425 430 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 DNAJB13P59910 316 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 DCP2Q8IU60 420 aaKnown RBP8.45□□□□□ -1.06
SYNE3-205ENST00000557275 CNTN4Q8IWV2 1026 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 ZCCHC10Q8TBK6 192 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 RAB40AQ8WXH6 277 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 MUL1Q969V5 352 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 hCG_1807616A0A1W2PRN6 198 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 RFXAPO00287 272 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 PPATQ06203 517 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 PMS2P3Q13401 168 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 CDKN2AIPNLQ96HQ2 116 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 ZDHHC3Q9NYG2 299 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 FBXL4Q9UKA2 621 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 TIMM13Q9Y5L4 95 aaPredicted RBP8.45□□□□□ -1.06
SYNE3-205ENST00000557275 SYPP08247 313 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 NDUFV2P19404 249 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 CD97P48960 835 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 TAS2R19P59542 299 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 STEAP4Q687X5 459 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 PLD5Q8N7P1 536 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 PDCD2LQ9BRP1 358 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 KATNB1Q9BVA0 655 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 A0A096LPI6 279 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 UNC119BA6NIH7 251 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 EPHX1P07099 455 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 OR5H8P0DN80 308 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 RAB3AP20336 220 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 TOB1P50616 345 aaPredicted RBP8.45□□□□□ -1.06
SYNE3-205ENST00000557275 FAM214AQ32MH5 1076 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 SIMC1Q8NDZ2 872 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 OR2A12Q8NGT7 310 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 DDIT4LQ96D03 193 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 PBX4Q9BYU1 374 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 ZNF446Q9NWS9 450 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 TIMM22Q9Y584 194 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 PLA2G7Q13093 441 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 LIPJQ5W064 366 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 OR5D14Q8NGL3 314 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 RNF141Q8WVD5 230 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 FUBP3Q96I24 572 aaKnown RBP eCLIP8.45□□□□□ -1.06
SYNE3-205ENST00000557275 A0A087WZY1 265 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 ERI3O43414 337 aaKnown RBP8.45□□□□□ -1.06
SYNE3-205ENST00000557275 TBPP20226 339 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 NDUFV1P49821 464 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 TGFBR3Q03167 851 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 RBM39Q14498 530 aaKnown RBP8.45□□□□□ -1.06
SYNE3-205ENST00000557275 RBMS2Q15434 407 aaKnown RBP8.45□□□□□ -1.06
SYNE3-205ENST00000557275 MPEG1Q2M385 716 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 PCGF3Q3KNV8 242 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 PMEPA1Q969W9 287 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 LMF2Q9BU23 707 aaKnown RBP8.45□□□□□ -1.06
SYNE3-205ENST00000557275 STRADBQ9C0K7 418 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 PDGFDQ9GZP0 370 aaPredicted RBP8.45□□□□□ -1.06
SYNE3-205ENST00000557275 SCML2Q9UQR0 700 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 DLG5Q8TDM6 1919 aa8.45□□□□□ -1.06
SYNE3-205ENST00000557275 EBLN1P0CF75 366 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 MAKP20794 623 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 CCNOP22674 350 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 FKBP1AP62942 108 aaKnown RBP8.44□□□□□ -1.06
SYNE3-205ENST00000557275 OR51Q1Q8NH59 317 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 C10orf82Q8WW14 230 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 ZNF486Q96H40 463 aaPredicted RBP8.44□□□□□ -1.06
SYNE3-205ENST00000557275 SDCBP2Q9H190 292 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 NIPAL2Q9H841 368 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 DENRO43583 198 aaKnown RBP8.44□□□□□ -1.06
SYNE3-205ENST00000557275 PTHP01270 115 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 ANXA7P20073 488 aaKnown RBP8.44□□□□□ -1.06
SYNE3-205ENST00000557275 MAXP61244 160 aa8.44□□□□□ -1.06
SYNE3-205ENST00000557275 RPL7AP62424 266 aaKnown RBP8.44□□□□□ -1.06
SYNE3-205ENST00000557275 POU6F2P78424 691 aaPredicted RBP8.44□□□□□ -1.06
SYNE3-205ENST00000557275 SLBPQ14493 270 aaKnown RBP eCLIP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms