RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 CTRCQ99895 268 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 MACROD1Q9BQ69 325 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 NTMT1Q9BV86 223 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 GPR62Q9BZJ7 368 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 METTL8Q9H825 291 aaKnown RBP4.73□□□□□ -1.65
SYNE2-223ENST00000557005 SYNPO2LQ9H987 977 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 CSNK1G3Q9Y6M4 447 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 CDH10Q9Y6N8 788 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 TEX51A0A1B0GUA7 166 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 FAM171A2A8MVW0 826 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 M0QZQ0 153 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 GPR37L1O60883 481 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 EPOP01588 193 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 C1SP09871 688 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 MAT2AP31153 395 aaKnown RBP4.73□□□□□ -1.65
SYNE2-223ENST00000557005 PSMB10P40306 273 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 FKBP1BP68106 108 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 FAPQ12884 760 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 TRAM1Q15629 374 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 CLLU1OSQ5K130 101 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 BAIAP2L2Q6UXY1 529 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 ZNF852Q6ZMS4 543 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 USP51Q70EK9 711 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 GET4Q7L5D6 327 aaPredicted RBP4.73□□□□□ -1.65
SYNE2-223ENST00000557005 OLIG3Q7RTU3 272 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 ZNF551Q7Z340 670 aaPredicted RBP4.73□□□□□ -1.65
SYNE2-223ENST00000557005 PRICKLE2Q7Z3G6 844 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 SLC9B2Q86UD5 537 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 TMEM145Q8NBT3 493 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 IL17RDQ8NFM7 739 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 OR8J1Q8NGP2 316 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 ACOT12Q8WYK0 555 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 ELMOD3Q96FG2 381 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 SCLYQ96I15 445 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 MSLNLQ96KJ4 702 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 KXD1Q9BQD3 176 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 SLC12A9Q9BXP2 914 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 GON7Q9BXV9 100 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 ALOXE3Q9BYJ1 711 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 SAP130Q9H0E3 1048 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 ARL6Q9H0F7 186 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 PCBD2Q9H0N5 130 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 BRF2Q9HAW0 419 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 MKKSQ9NPJ1 570 aaPredicted RBP4.73□□□□□ -1.65
SYNE2-223ENST00000557005 POLE3Q9NRF9 147 aa4.73□□□□□ -1.65
SYNE2-223ENST00000557005 TEX10Q9NXF1 929 aaPredicted RBP4.73□□□□□ -1.65
SYNE2-223ENST00000557005 AK6Q9Y3D8 172 aaKnown RBP4.73□□□□□ -1.65
SYNE2-223ENST00000557005 NPIPA5A0A0B4J1W7 369 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 NPIPA7E9PJI5 369 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 B4GALT3O60512 393 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 DUSP11O75319 330 aaKnown RBP4.72□□□□□ -1.65
SYNE2-223ENST00000557005 RENP00797 406 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 NPIPA8P0DM63 369 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 AHCYP23526 432 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 TACR1P25103 407 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 CCR7P32248 378 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 MAGEA11P43364 429 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 SLAMF1Q13291 335 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 BAK1Q16611 211 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 C6orf132Q5T0Z8 1188 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 ABHD13Q7L211 337 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 CMTM8Q8IZV2 173 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 TRAM1L1Q8N609 369 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 OR13C3Q8NGS6 347 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 THAP6Q8TBB0 222 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 C4orf36Q96KX1 117 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 DOK1Q99704 481 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 RTP3Q9BQQ7 232 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 EFCAB11Q9BUY7 163 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 PNO1Q9NRX1 252 aaKnown RBP4.72□□□□□ -1.65
SYNE2-223ENST00000557005 LYARQ9NX58 379 aaKnown RBP4.72□□□□□ -1.65
SYNE2-223ENST00000557005 TAS2R10Q9NYW0 307 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 DPP7Q9UHL4 492 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 KLHL21Q9UJP4 597 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 TMPRSS11EQ9UL52 423 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 ENPP4Q9Y6X5 453 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 COL11A2P13942 1736 aaPredicted RBP4.72□□□□□ -1.65
SYNE2-223ENST00000557005 LOC105369274A0A096LPK9 316 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 A0A0G2JPF8 293 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 HNRNPCL3B7ZW38 293 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 DISC1C4P0D8 188 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 BLOC1S5-TXNDC5H3BN57 136 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 SOCS7O14512 581 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 SLC9A3R1O14745 358 aaPredicted RBP4.72□□□□□ -1.65
SYNE2-223ENST00000557005 HNRNPCL4P0DMR1 293 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 ACP2P11117 423 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 HOXD8P13378 290 aaPredicted RBP4.72□□□□□ -1.65
SYNE2-223ENST00000557005 ITPKBP27987 946 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 EIF1AXP47813 144 aaKnown RBP4.72□□□□□ -1.65
SYNE2-223ENST00000557005 CTBSQ01459 385 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 PRKCZQ05513 592 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 SEMA3BQ13214 749 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 SLC14A1Q13336 389 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 TEAD2Q15562 447 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 TMIGD1Q6UXZ0 262 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 AMZ2Q86W34 360 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 OR4N4Q8N0Y3 316 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 MFSD4AQ8N468 514 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 ZNF676Q8N7Q3 588 aa4.72□□□□□ -1.65
SYNE2-223ENST00000557005 OR9A2Q8NGT5 310 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms