RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 PRKD3O94806 890 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 RASAL1O95294 804 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 VIPP01282 170 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 SERPIND1P05546 499 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 IGHV4-34P06331 123 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 LYNP07948 512 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 CHRM5P08912 532 aaPredicted RBP4.2□□□□□ -1.74
SRP54-212ENST00000556992 FAM58BPP0C7Q3 252 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 F3P13726 295 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 CTSEP14091 401 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 HOXB9P17482 250 aaPredicted RBP4.2□□□□□ -1.74
SRP54-212ENST00000556992 CD72P21854 359 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 UQCRC2P22695 453 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 KDELR2P33947 212 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 BSGP35613 385 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 CHI3L1P36222 383 aaPredicted RBP4.2□□□□□ -1.74
SRP54-212ENST00000556992 ACTR1BP42025 376 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 CDKN2CP42773 168 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 CRATP43155 626 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 AQP4P55087 323 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 STARD6P59095 220 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 ACTR1AP61163 376 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 STXBP1P61764 594 aaKnown RBP4.2□□□□□ -1.74
SRP54-212ENST00000556992 RPS15AP62244 130 aaKnown RBP4.2□□□□□ -1.74
SRP54-212ENST00000556992 MEF2AQ02078 507 aaPredicted RBP4.2□□□□□ -1.74
SRP54-212ENST00000556992 BIRC2Q13490 618 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 KIR2DS5Q14953 304 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 MLC1Q15049 377 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 RGNQ15493 299 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 ADRM1Q16186 407 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 ZNF630Q2M218 657 aaPredicted RBP4.2□□□□□ -1.74
SRP54-212ENST00000556992 ALG11Q2TAA5 492 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 C19orf54Q5BKX5 351 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 MANEAQ5SRI9 462 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 ADNP2Q6IQ32 1131 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 HMBOX1Q6NT76 420 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 TMEM154Q6P9G4 183 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 KLHL35Q6PF15 583 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 BHLHB9Q6PI77 547 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 ZNF788Q6ZQV5 615 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 NUDT13Q86X67 352 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 ST13P4Q8IZP2 240 aaPredicted RBP4.2□□□□□ -1.74
SRP54-212ENST00000556992 SVOPLQ8N434 492 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 CBR4Q8N4T8 237 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 CAMKK1Q8N5S9 505 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 FAM47BQ8NA70 645 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 AVL9Q8NBF6 648 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 MFSD9Q8NBP5 474 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 C11orf65Q8NCR3 313 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 ZNF548Q8NEK5 533 aaPredicted RBP4.2□□□□□ -1.74
SRP54-212ENST00000556992 CADM4Q8NFZ8 388 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 OR2L3Q8NG85 312 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 OR4A15Q8NGL6 344 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 CREB3L4Q8TEY5 395 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 NCLNQ969V3 563 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 TSACCQ96A04 125 aaPredicted RBP4.2□□□□□ -1.74
SRP54-212ENST00000556992 SDCCAG3Q96C92 435 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 TM4SF18Q96CE8 201 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 SLC29A1Q99808 456 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 CIB1Q99828 191 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 MYOCQ99972 504 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 DPH7Q9BTV6 452 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 MS4A8Q9BY19 250 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 NLNQ9BYT8 704 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 FZD3Q9NPG1 666 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 SLC6A13Q9NSD5 602 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 ACSS1Q9NUB1 689 aaPredicted RBP4.2□□□□□ -1.74
SRP54-212ENST00000556992 TBCCD1Q9NVR7 557 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 ADPRHL2Q9NX46 363 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 THUMPD1Q9NXG2 353 aaKnown RBP4.2□□□□□ -1.74
SRP54-212ENST00000556992 EHD3Q9NZN3 535 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 NDUFA13Q9P0J0 144 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 ZNF624Q9P2J8 865 aaPredicted RBP4.2□□□□□ -1.74
SRP54-212ENST00000556992 ANKMY1Q9P2S6 941 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 ZNF639Q9UID6 485 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 PSME2Q9UL46 239 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 FAF1Q9UNN5 650 aaPredicted RBP4.2□□□□□ -1.74
SRP54-212ENST00000556992 EXO1Q9UQ84 846 aaKnown RBP4.2□□□□□ -1.74
SRP54-212ENST00000556992 SH2B3Q9UQQ2 575 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 BTBD3Q9Y2F9 522 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 GREB1Q4ZG55 1949 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 MYO18AQ92614 2054 aaKnown RBP4.2□□□□□ -1.74
SRP54-212ENST00000556992 MYO16Q9Y6X6 1858 aa4.2□□□□□ -1.74
SRP54-212ENST00000556992 VPS13AQ96RL7 3174 aa4.19□□□□□ -1.74
SRP54-212ENST00000556992 UNC79Q9P2D8 2635 aa4.19□□□□□ -1.74
SRP54-212ENST00000556992 A0A1W2PPC4 97 aa4.19□□□□□ -1.74
SRP54-212ENST00000556992 FEZF1A0PJY2 475 aa4.19□□□□□ -1.74
SRP54-212ENST00000556992 C1orf226A1L170 272 aa4.19□□□□□ -1.74
SRP54-212ENST00000556992 FAM149AA5PLN7 773 aa4.19□□□□□ -1.74
SRP54-212ENST00000556992 A6NCN8 305 aa4.19□□□□□ -1.74
SRP54-212ENST00000556992 OR6C74A6NCV1 312 aa4.19□□□□□ -1.74
SRP54-212ENST00000556992 SAC3D1A6NKF1 404 aa4.19□□□□□ -1.74
SRP54-212ENST00000556992 C2orf74A8MZ97 194 aa4.19□□□□□ -1.74
SRP54-212ENST00000556992 H0YAE9 185 aa4.19□□□□□ -1.74
SRP54-212ENST00000556992 BTN3A3O00478 584 aa4.19□□□□□ -1.74
SRP54-212ENST00000556992 PLPP1O14494 284 aa4.19□□□□□ -1.74
SRP54-212ENST00000556992 ACOX3O15254 700 aa4.19□□□□□ -1.74
SRP54-212ENST00000556992 NDUFS4O43181 175 aa4.19□□□□□ -1.74
SRP54-212ENST00000556992 SH3BP5O60239 455 aa4.19□□□□□ -1.74
SRP54-212ENST00000556992 TPST1O60507 370 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms