RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 CBX6O95503 412 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 KITP10721 976 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 MST1P26927 711 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 EPHA3P29320 983 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 NTSP30990 170 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 HPCAL1P37235 193 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 MAP3K8P41279 467 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 MC3RP41968 323 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 NR0B1P51843 470 aaKnown RBP8.89□□□□□ -0.99
SRP54-210ENST00000556380 TDGF1P3P51864 188 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 WNT3P56703 355 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 DCAF7P61962 342 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 PMP22Q01453 160 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 NTRK2Q16620 822 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 MAPKAPK3Q16644 382 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 SLC9B1Q4ZJI4 515 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 CPTPQ5TA50 214 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 C6orf163Q5TEZ5 329 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 EPGNQ6UW88 154 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 TMEM107Q6UX40 140 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 NPSR1Q6W5P4 371 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 TMEM64Q6YI46 380 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 RTL4Q6ZR62 310 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.89□□□□□ -0.99
SRP54-210ENST00000556380 SIAH3Q8IW03 269 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 SULF2Q8IWU5 870 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 GOLM1Q8NBJ4 401 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 TMEM178AQ8NBL3 297 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 GALNT11Q8NCW6 608 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 PSMA8Q8TAA3 256 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 SLC22A8Q8TCC7 542 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 LRRC8CQ8TDW0 803 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 ACTRT2Q8TDY3 377 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 PAQR8Q8TEZ7 354 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 HOXB13Q92826 284 aaPredicted RBP8.89□□□□□ -0.99
SRP54-210ENST00000556380 GTPBP3Q969Y2 492 aaKnown RBP8.89□□□□□ -0.99
SRP54-210ENST00000556380 SPACA9Q96E40 222 aaPredicted RBP8.89□□□□□ -0.99
SRP54-210ENST00000556380 LCORQ96JN0 433 aaPredicted RBP8.89□□□□□ -0.99
SRP54-210ENST00000556380 MAGEB18Q96M61 343 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 C5orf34Q96MH7 638 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 BTBD9Q96Q07 612 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 SLX1AQ9BQ83 275 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 ITPAQ9BY32 194 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 TIMMDC1Q9NPL8 285 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 SIRT3Q9NTG7 399 aaPredicted RBP8.89□□□□□ -0.99
SRP54-210ENST00000556380 DEPPQ9NTK1 212 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 HPF1Q9NWY4 346 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 PRODH2Q9UF12 536 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 BCAP29Q9UHQ4 241 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 ERVK-11Q9UQG0 969 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 CFL2Q9Y281 166 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 GPR45Q9Y5Y3 372 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 ESPL1Q14674 2120 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 DOPEY1Q5JWR5 2465 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 A0A0G2JMM0 328 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 A0A1W2PPB8 328 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 A0A1W2PRS3 328 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 PINLYPA6NC86 204 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 TRPC5OSA6NMA1 111 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 KIR3DP1A8MWS1 328 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 ACOX3O15254 700 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 PEX1O43933 1283 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 SCN2BO60939 215 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 CCL3P10147 92 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 NAGAP17050 411 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 EFNA1P20827 205 aaPredicted RBP8.88□□□□□ -0.99
SRP54-210ENST00000556380 RPL3P39023 403 aaKnown RBP8.88□□□□□ -0.99
SRP54-210ENST00000556380 CDK9P50750 372 aaKnown RBP8.88□□□□□ -0.99
SRP54-210ENST00000556380 PHC1P78364 1004 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 FOXO1Q12778 655 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 EXOSC6Q5RKV6 272 aaKnown RBP8.88□□□□□ -0.99
SRP54-210ENST00000556380 SPATA19Q7Z5L4 167 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 DND1Q8IYX4 353 aaKnown RBP8.88□□□□□ -0.99
SRP54-210ENST00000556380 TAGAPQ8N103 731 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 BCORP1Q8N888 145 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 ZFP62Q8NB50 900 aaPredicted RBP8.88□□□□□ -0.99
SRP54-210ENST00000556380 PSD4Q8NDX1 1056 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 OR10G3Q8NGC4 313 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 OR8J2Q8NGG1 315 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 OR5P2Q8WZ92 322 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 NR4A3Q92570 626 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 TMEM125Q96AQ2 219 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 HSPBAP1Q96EW2 488 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 GIMAP5Q96F15 307 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 ZBED6CLQ96FA7 236 aaPredicted RBP8.88□□□□□ -0.99
SRP54-210ENST00000556380 TEX37Q96LM6 180 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 FRMD6Q96NE9 622 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 OR52B2Q96RD2 323 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 FOLH1BQ9HBA9 442 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 AGPAT4Q9NRZ5 378 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 AIG1Q9NVV5 245 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 CNOT11Q9UKZ1 510 aaKnown RBP8.88□□□□□ -0.99
SRP54-210ENST00000556380 KLF13Q9Y2Y9 288 aaPredicted RBP8.88□□□□□ -0.99
SRP54-210ENST00000556380 NPFFR2Q9Y5X5 522 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 CHCHD2Q9Y6H1 151 aaPredicted RBP8.88□□□□□ -0.99
SRP54-210ENST00000556380 USH1CQ9Y6N9 552 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 PTPN13Q12923 2485 aa8.88□□□□□ -0.99
SRP54-210ENST00000556380 HECTD1Q9ULT8 2610 aa8.87□□□□□ -0.99
SRP54-210ENST00000556380 GOLGA8QA0A0J9YX86 632 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms