RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 TO15178 435 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 PDPK1O15530 556 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 COQ9O75208 318 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 LYPLA1O75608 230 aaPredicted RBP10.6□□□□□ -0.71
SLIRP-205ENST00000556310 PPM1BO75688 479 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 JUNP05412 331 aaKnown RBP10.6□□□□□ -0.71
SLIRP-205ENST00000556310 IFI6P09912 130 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 BCKDHAP12694 445 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 ABOP16442 354 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 NAGAP17050 411 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 DRD5P21918 477 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 PPICP45877 212 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 FBXW4P57775 412 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 ABCE1P61221 599 aaKnown RBP10.6□□□□□ -0.71
SLIRP-205ENST00000556310 KCNJ2P63252 427 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 PSPHP78330 225 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 RPP38P78345 283 aaKnown RBP10.6□□□□□ -0.71
SLIRP-205ENST00000556310 PLCXD2Q0VAA5 305 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 PDE7AQ13946 482 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 PRSS53Q2L4Q9 553 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 ATP6AP1LQ52LC2 224 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 SPPL2CQ8IUH8 684 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 PRR22Q8IZ63 422 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 KIRREL3Q8IZU9 778 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 FAM109AQ8N4B1 249 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 TMEM251Q8N6I4 163 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 OR7G2Q8NG99 324 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 OR52N2Q8NGI0 321 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 OR5M3Q8NGP4 307 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 SPPL2AQ8TCT8 520 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 VSTM2LQ96N03 204 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 AMDHD1Q96NU7 426 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 GLIPR2Q9H4G4 154 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 REEP4Q9H6H4 257 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 SUCOQ9UBS9 1254 aaKnown RBP10.6□□□□□ -0.71
SLIRP-205ENST00000556310 TINAGQ9UJW2 476 aa10.6□□□□□ -0.71
SLIRP-205ENST00000556310 BOKQ9UMX3 212 aaPredicted RBP10.6□□□□□ -0.71
SLIRP-205ENST00000556310 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.6□□□□□ -0.71
SLIRP-205ENST00000556310 NCOA6Q14686 2063 aaPredicted RBP10.6□□□□□ -0.71
SLIRP-205ENST00000556310 UNC79Q9P2D8 2635 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 ATP6AP2A0A1C7CYW4 349 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 TMEM120BA0PK00 339 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 LRRC3CA6NJW4 275 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 PLOD2O00469 737 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 ITM2AO43736 263 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 CDC40O60508 579 aaKnown RBP eCLIP10.59□□□□□ -0.71
SLIRP-205ENST00000556310 PEX11AO75192 247 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 ERN1O75460 977 aaKnown RBP10.59□□□□□ -0.71
SLIRP-205ENST00000556310 ATP6AP2O75787 350 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 LRATO95237 230 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 PSMG1O95456 288 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 GP1BBP13224 206 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 DDX5P17844 614 aaKnown RBP10.59□□□□□ -0.71
SLIRP-205ENST00000556310 BGNP21810 368 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 HPCAL1P37235 193 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 RPL3P39023 403 aaKnown RBP10.59□□□□□ -0.71
SLIRP-205ENST00000556310 MC3RP41968 323 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 SLC18A1P54219 525 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 ZNF155Q12901 538 aaPredicted RBP10.59□□□□□ -0.71
SLIRP-205ENST00000556310 CASP8Q14790 479 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 C3AR1Q16581 482 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 C6orf136Q5SQH8 315 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 HHATQ5VTY9 493 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 MTFR2Q6P444 385 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 ARHGAP11AQ6P4F7 1023 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 TMEM81Q6P7N7 255 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 PAOXQ6QHF9 649 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 TMEM107Q6UX40 140 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 FGD2Q7Z6J4 655 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 SLC34A3Q8N130 599 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 OR2L13Q8N349 312 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 ZNF781Q8N8C0 355 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 ANKRD42Q8N9B4 389 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 CLHC1Q8NHS4 586 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 ZFP28Q8NHY6 868 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 DIO2Q92813 273 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 GFM2Q969S9 779 aaKnown RBP10.59□□□□□ -0.71
SLIRP-205ENST00000556310 PPCDCQ96CD2 204 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 TLCD1Q96CP7 247 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 MTERF3Q96E29 417 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 OMA1Q96E52 524 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 ZNF597Q96LX8 424 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 C3orf30Q96M34 536 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 DOHHQ9BU89 302 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 ZNF703Q9H7S9 590 aaPredicted RBP10.59□□□□□ -0.71
SLIRP-205ENST00000556310 ANKRA2Q9H9E1 313 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 FOLH1BQ9HBA9 442 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 PROK2Q9HC23 129 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 TMBIM4Q9HC24 238 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 ZFP64Q9NPA5 681 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 DDX18Q9NVP1 670 aaKnown RBP10.59□□□□□ -0.71
SLIRP-205ENST00000556310 PGPEP1Q9NXJ5 209 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 TAS2R9Q9NYW1 312 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 GIMAP2Q9UG22 337 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 SH3BGRL2Q9UJC5 107 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 HAO1Q9UJM8 370 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.59□□□□□ -0.71
SLIRP-205ENST00000556310 GPR55Q9Y2T6 319 aaPredicted RBP10.59□□□□□ -0.71
SLIRP-205ENST00000556310 RAP2CQ9Y3L5 183 aa10.59□□□□□ -0.71
SLIRP-205ENST00000556310 A0A1B0GTH9 108 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms