RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	GADD45A	P24522	165 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	CTSC	P53634	463 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	AP3S2	P59780	193 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	PPP3R1	P63098	170 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	CD300C	Q08708	224 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	RGN	Q15493	299 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	TMEM31	Q5JXX7	168 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	ZNF782	Q6ZMW2	699 aa	Predicted RBP	11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	ADGRD2	Q7Z7M1	963 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	SLC5A8	Q8N695	610 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	SFXN1	Q9H9B4	322 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	SEC61A2	Q9H9S3	476 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	IFT46	Q9NQC8	304 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	SAGE1	Q9NXZ1	904 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	WDR37	Q9Y2I8	494 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	CABIN1	Q9Y6J0	2220 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	KCNE1B	A0A087WTH5	132 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	IRGM	A1A4Y4	181 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	RTCA	O00442	366 aa	Known RBP	11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	PROM1	O43490	865 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	APOC3	P02656	99 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	KEL	P23276	732 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	GRK5	P34947	590 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	ADH7	P40394	386 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	SLC7A9	P82251	487 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	GINS1	Q14691	196 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	GRK1	Q15835	563 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	AMZ1	Q400G9	498 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	C22orf42	Q6IC83	251 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	SHF	Q7M4L6	423 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	ZNF101	Q8IZC7	436 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	CADM3	Q8N126	398 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	OR8J2	Q8NGG1	315 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	THEM6	Q8WUY1	208 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	C7orf34	Q96L11	122 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	GAS2L1	Q99501	681 aa	Predicted RBP	11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	EPYC	Q99645	322 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	MGLL	Q99685	303 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	RBCK1	Q9BYM8	510 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	PRRG4	Q9BZD6	226 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	UCK2	Q9BZX2	261 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	MMP27	Q9H306	513 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029		A0A1B0GVC2	190 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	OR2A25	A4D2G3	310 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029		A6NIN4	97 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	WWP2	O00308	870 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	MRPS14	O60783	128 aa	Known RBP	11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	KLF8	O95600	359 aa	Predicted RBP	11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	SLC16A8	O95907	504 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	ALPP	P05187	535 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	C1S	P09871	688 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	ZNF823	P16415	610 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	NR4A2	P43354	598 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	GDI2	P50395	445 aa	Known RBP	11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	PFN3	P60673	137 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	ARF3	P61204	181 aa	Predicted RBP	11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	ARF1	P84077	181 aa	Known RBP	11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	USF2	Q15853	346 aa	Predicted RBP	11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	CDKN3	Q16667	212 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	HYAL4	Q2M3T9	481 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	PLPP6	Q8IY26	295 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	OR2L8	Q8NGY9	312 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	AKAP1	Q92667	903 aa	Known RBP eCLIP	11.65	□□□□□ -0.54	3e-8	■■■□□ 15.6
TMPO-212	ENST00000556029	ABCG4	Q9H172	646 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	TRPV4	Q9HBA0	871 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	FBXO8	Q9NRD0	319 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	SIRT5	Q9NXA8	310 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	GPR83	Q9NYM4	423 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	SPATA7	Q9P0W8	599 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	MBD1	Q9UIS9	605 aa	Predicted RBP	11.65	□□□□□ -0.54
TMPO-212	ENST00000556029		A0A1W2PQU0	124 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029		M0R129	80 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	CLDN4	O14493	209 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	AKAP8	O43823	692 aa	Known RBP	11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	SCGB1D2	O95969	90 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	CYP17A1	P05093	508 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	CD40LG	P29965	261 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	HOXA9	P31269	272 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	TCTN1	Q2MV58	587 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	FAM214A	Q32MH5	1076 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	KLHL36	Q8N4N3	616 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	RHOXF1	Q8NHV9	184 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	ZNF675	Q8TD23	568 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	HAVCR1	Q96D42	359 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	ZNF514	Q96K75	400 aa	Predicted RBP	11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	ALOXE3	Q9BYJ1	711 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	NLK	Q9UBE8	527 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	TET1	Q8NFU7	2136 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	CLDN24	A6NM45	220 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	ETFA	P13804	333 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	DRD5	P21918	477 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	PRPH2	P23942	346 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	LIPA	P38571	399 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	CCR2	P41597	374 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	ZNF776	Q68DI1	518 aa	Predicted RBP	11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	LAIR1	Q6GTX8	287 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	RAB12	Q6IQ22	244 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	LINC00299	Q6ZSB3	139 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	CCDC116	Q8IYX3	515 aa		11.65	□□□□□ -0.54
TMPO-212	ENST00000556029	RASSF5	Q8WWW0	418 aa		11.65	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms