RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 ZFP28Q8NHY6 868 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 NT5CQ8TCD5 201 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 ZFP90Q8TF47 636 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 MS4A6EQ96DS6 147 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 CLIP3Q96DZ5 547 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 SLC47A1Q96FL8 570 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 AURKBQ96GD4 344 aaPredicted RBP6.42□□□□□ -1.38
SLIRP-204ENST00000555890 HSPA12BQ96MM6 686 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 C17orf62Q9BQA9 187 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 SLC35A5Q9BS91 424 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 CHID1Q9BWS9 393 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 SORBS1Q9BX66 1292 aaKnown RBP6.42□□□□□ -1.38
SLIRP-204ENST00000555890 ZNF717Q9BY31 904 aaPredicted RBP6.42□□□□□ -1.38
SLIRP-204ENST00000555890 NLNQ9BYT8 704 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 GAREM1Q9H706 876 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 COQ10BQ9H8M1 238 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 DCAF13Q9NV06 445 aaKnown RBP6.42□□□□□ -1.38
SLIRP-204ENST00000555890 HRASLS2Q9NWW9 162 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 LYARQ9NX58 379 aaKnown RBP6.42□□□□□ -1.38
SLIRP-204ENST00000555890 EHD3Q9NZN3 535 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 APOBEC3BQ9UH17 382 aaKnown RBP6.42□□□□□ -1.38
SLIRP-204ENST00000555890 SLCO1B1Q9Y6L6 691 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 MXRA5Q9NR99 2828 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 A0A0A6YYD5 115 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 A0A0J9YY10 115 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 A0A1W2PR77 199 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 C1orf226A1L170 272 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 OR2A25A4D2G3 310 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 MAGEA13PA6NCF6 341 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 SAC3D1A6NKF1 404 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 TLR4O00206 839 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 GNGT2O14610 69 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 VILLO15195 856 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 CLOCKO15516 846 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 DENRO43583 198 aaKnown RBP6.41□□□□□ -1.38
SLIRP-204ENST00000555890 SERPINA1P01009 418 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 IFNA14P01570 189 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 CSF2P04141 144 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 ZNF26P17031 533 aaPredicted RBP6.41□□□□□ -1.38
SLIRP-204ENST00000555890 POLR2CP19387 275 aaPredicted RBP6.41□□□□□ -1.38
SLIRP-204ENST00000555890 EFNA1P20827 205 aaPredicted RBP6.41□□□□□ -1.38
SLIRP-204ENST00000555890 HIST1H1TP22492 207 aaPredicted RBP6.41□□□□□ -1.38
SLIRP-204ENST00000555890 ATP5A1P25705 553 aaKnown RBP6.41□□□□□ -1.38
SLIRP-204ENST00000555890 NTSP30990 170 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 KDELR2P33947 212 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 SOAT1P35610 550 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 CRATP43155 626 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 CTSKP43235 329 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 RXRGP48443 463 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 PRIM2P49643 509 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 CCT8P50990 548 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 GTF2A1P52655 376 aaPredicted RBP6.41□□□□□ -1.38
SLIRP-204ENST00000555890 MANFP55145 182 aaKnown RBP6.41□□□□□ -1.38
SLIRP-204ENST00000555890 HBA1P69905 142 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 HHEXQ03014 270 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 RBBP4Q09028 425 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 TARDBPQ13148 414 aaKnown RBP eCLIP6.41□□□□□ -1.38
SLIRP-204ENST00000555890 FADDQ13158 208 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 SLAMF1Q13291 335 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 C1orf61Q13536 156 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 RGNQ15493 299 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 SPDYE7PQ495Y7 208 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 ZNF385BQ569K4 471 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 CCDC157Q569K6 752 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 WDR45BQ5MNZ6 344 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 MANEAQ5SRI9 462 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 GCNT6Q5T4J0 391 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 HMBOX1Q6NT76 420 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 FIGLAQ6QHK4 219 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 SPESP1Q6UW49 350 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 TMEM26Q6ZUK4 368 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 OVCH1Q7RTY7 1134 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 FAM20CQ8IXL6 584 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 ZZZ3Q8IYH5 903 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 ACOT4Q8N9L9 421 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 C11orf65Q8NCR3 313 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 OR52N2Q8NGI0 321 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 FBXO30Q8TB52 745 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 PNPT1Q8TCS8 783 aaKnown RBP6.41□□□□□ -1.38
SLIRP-204ENST00000555890 SLC37A2Q8TED4 501 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 DIO2Q92813 273 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 EXTL1Q92935 676 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 RERGQ96A58 199 aaPredicted RBP6.41□□□□□ -1.38
SLIRP-204ENST00000555890 CIDECQ96AQ7 238 aaPredicted RBP6.41□□□□□ -1.38
SLIRP-204ENST00000555890 SDCCAG3Q96C92 435 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 ZBED6CLQ96FA7 236 aaPredicted RBP6.41□□□□□ -1.38
SLIRP-204ENST00000555890 PYURFQ96I23 114 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 VPS50Q96JG6 964 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 ZNF578Q96N58 590 aaPredicted RBP6.41□□□□□ -1.38
SLIRP-204ENST00000555890 OR2A14Q96R47 310 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 CIB1Q99828 191 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 ARPC5LQ9BPX5 153 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 OSBPL11Q9BXB4 747 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.41□□□□□ -1.38
SLIRP-204ENST00000555890 TWSG1Q9GZX9 223 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 TCEAL2Q9H3H9 227 aaPredicted RBP6.41□□□□□ -1.38
SLIRP-204ENST00000555890 KLHL31Q9H511 634 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 PRDM7Q9NQW5 492 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 SEMA3GQ9NS98 782 aa6.41□□□□□ -1.38
SLIRP-204ENST00000555890 ACSS1Q9NUB1 689 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms