RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 ADIPOR1Q96A54 375 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 C16orf58Q96GQ5 468 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 THOC3Q96J01 351 aaKnown RBP11.56□□□□□ -0.56
SHMT2-221ENST00000555773 LCORQ96JN0 433 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-221ENST00000555773 SLC35G5Q96KT7 338 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 BTBD9Q96Q07 612 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 SCN2AQ99250 2005 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 STACQ99469 402 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 THUMPD3Q9BV44 507 aaKnown RBP11.56□□□□□ -0.56
SHMT2-221ENST00000555773 WWTR1Q9GZV5 400 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 PIGUQ9H490 435 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 DUSP22Q9NRW4 184 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 MYOTQ9UBF9 498 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 TEKT2Q9UIF3 430 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 CHD8Q9HCK8 2581 aa11.56□□□□□ -0.56
SHMT2-221ENST00000555773 CCDC88CQ9P219 2028 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 NUP210LQ5VU65 1888 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 FRG2CA6NGY1 282 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 TO15178 435 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 NKX2-2O95096 273 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 ITGAMP11215 1152 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 SLC6A2P23975 617 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 ITGA3P26006 1051 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 ITPKBP27987 946 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 CRATP43155 626 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 MVDP53602 400 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 PSME3P61289 254 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 PSG6Q00889 435 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 ZNF155Q12901 538 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-221ENST00000555773 CAPRIN1Q14444 709 aaKnown RBP11.55□□□□□ -0.56
SHMT2-221ENST00000555773 CYP27C1Q4G0S4 372 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 PIGGQ5H8A4 983 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 ANGPTL8Q6UXH0 198 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 CCDC121Q6ZUS5 278 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 RPS19BP1Q86WX3 136 aaKnown RBP11.55□□□□□ -0.56
SHMT2-221ENST00000555773 PGAM4Q8N0Y7 254 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 TAGAPQ8N103 731 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 GALNT16Q8N428 558 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 KIF2BQ8N4N8 673 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 SLC15A4Q8N697 577 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 ZNF441Q8N8Z8 693 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 APOBEC4Q8WW27 367 aaKnown RBP11.55□□□□□ -0.56
SHMT2-221ENST00000555773 PSMF1Q92530 271 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 HSPBAP1Q96EW2 488 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 AURKBQ96GD4 344 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-221ENST00000555773 ZNF354BQ96LW1 612 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 CPPED1Q9BRF8 314 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-221ENST00000555773 ITPAQ9BY32 194 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 KAT8Q9H7Z6 458 aaKnown RBP11.55□□□□□ -0.56
SHMT2-221ENST00000555773 Q9N2J8 555 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 EQTNQ9NQ60 294 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 EXD2Q9NVH0 621 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 YARS2Q9Y2Z4 477 aaKnown RBP11.55□□□□□ -0.56
SHMT2-221ENST00000555773 KCNMB2Q9Y691 235 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 ASPMQ8IZT6 3477 aa11.55□□□□□ -0.56
SHMT2-221ENST00000555773 TPRP12270 2363 aaKnown RBP11.54□□□□□ -0.56
SHMT2-221ENST00000555773 TMEM200CA6NKL6 621 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 A8MUI8 341 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 PRKNO60260 465 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-221ENST00000555773 AK1P00568 194 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 CELA2AP08217 269 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 CT45A8P0DMV1 189 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 CT45A9P0DMV2 189 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 BMP2P12643 396 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 NAGAP17050 411 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 GABRA3P34903 492 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 TRHRP34981 398 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-221ENST00000555773 CPOXP36551 454 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 KHKP50053 298 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 NRG3P56975 720 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 MLF1P58340 268 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 SLC25A3Q00325 362 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 MEP1AQ16819 746 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 SPATS1Q496A3 300 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 CT45A2Q5DJT8 189 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 CRB2Q5IJ48 1285 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.54□□□□□ -0.56
SHMT2-221ENST00000555773 ATAD3BQ5T9A4 648 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 TCTN3Q6NUS6 607 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 SERPINA11Q86U17 422 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 SLC44A2Q8IWA5 706 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-221ENST00000555773 SLC15A3Q8IY34 581 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 METTL25Q8N6Q8 603 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 SLC16A11Q8NCK7 471 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 RBM15BQ8NDT2 890 aaKnown RBP11.54□□□□□ -0.56
SHMT2-221ENST00000555773 BRIX1Q8TDN6 353 aaKnown RBP11.54□□□□□ -0.56
SHMT2-221ENST00000555773 GPR151Q8TDV0 419 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 SLC9A6Q92581 669 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 JADE3Q92613 823 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 SLC35A4Q96G79 324 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 OR7D2Q96RA2 312 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 GAL3ST4Q96RP7 486 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 ECSITQ9BQ95 431 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 SLC39A3Q9BRY0 314 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 YIPF4Q9BSR8 244 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 SPATA9Q9BWV2 254 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 OR51I1Q9H343 314 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 CDCP1Q9H5V8 836 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 CPNE5Q9HCH3 593 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 SPAG4Q9NPE6 437 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms