RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 HIVEP2P31629 2446 aa2.1□□□□□ -2.07
SNX6-204ENST00000555541 C11orf98E9PRG8 122 aa2.09□□□□□ -2.07
SNX6-204ENST00000555541 WWP2O00308 870 aa2.09□□□□□ -2.07
SNX6-204ENST00000555541 EI24O14681 340 aa2.09□□□□□ -2.07
SNX6-204ENST00000555541 DFNA5O60443 496 aa2.09□□□□□ -2.07
SNX6-204ENST00000555541 RANBP6O60518 1105 aaKnown RBP2.09□□□□□ -2.07
SNX6-204ENST00000555541 FCARP24071 287 aa2.09□□□□□ -2.07
SNX6-204ENST00000555541 METAP1P53582 386 aa2.09□□□□□ -2.07
SNX6-204ENST00000555541 UCP2P55851 309 aa2.09□□□□□ -2.07
SNX6-204ENST00000555541 TSPY1Q01534 308 aa2.09□□□□□ -2.07
SNX6-204ENST00000555541 LRRC63Q05C16 580 aa2.09□□□□□ -2.07
SNX6-204ENST00000555541 SMC1AQ14683 1233 aaKnown RBP2.09□□□□□ -2.07
SNX6-204ENST00000555541 EXOSC7Q15024 291 aaKnown RBP2.09□□□□□ -2.07
SNX6-204ENST00000555541 KBTBD12Q3ZCT8 623 aa2.09□□□□□ -2.07
SNX6-204ENST00000555541 C9orf40Q8IXQ3 194 aa2.09□□□□□ -2.07
SNX6-204ENST00000555541 ZNF433Q8N7K0 673 aaPredicted RBP2.09□□□□□ -2.07
SNX6-204ENST00000555541 CTRCQ99895 268 aa2.09□□□□□ -2.07
SNX6-204ENST00000555541 SLC25A39Q9BZJ4 359 aaPredicted RBP2.09□□□□□ -2.07
SNX6-204ENST00000555541 Q9H3A6 140 aa2.09□□□□□ -2.07
SNX6-204ENST00000555541 ZNF331Q9NQX6 463 aaPredicted RBP2.09□□□□□ -2.07
SNX6-204ENST00000555541 PNPLA3Q9NST1 481 aa2.09□□□□□ -2.07
SNX6-204ENST00000555541 ACOXLQ9NUZ1 547 aa2.09□□□□□ -2.07
SNX6-204ENST00000555541 A0A0A6YYC8 382 aaPredicted RBP2.08□□□□□ -2.08
SNX6-204ENST00000555541 HMGB1P1B2RPK0 211 aaPredicted RBP2.08□□□□□ -2.08
SNX6-204ENST00000555541 I3L1I5 382 aaPredicted RBP2.08□□□□□ -2.08
SNX6-204ENST00000555541 OR7A17O14581 309 aa2.08□□□□□ -2.08
SNX6-204ENST00000555541 LATO43561 262 aa2.08□□□□□ -2.08
SNX6-204ENST00000555541 FOXH1O75593 365 aa2.08□□□□□ -2.08
SNX6-204ENST00000555541 NOL4O94818 638 aa2.08□□□□□ -2.08
SNX6-204ENST00000555541 GHRP10912 638 aa2.08□□□□□ -2.08
SNX6-204ENST00000555541 CCNE1P24864 410 aa2.08□□□□□ -2.08
SNX6-204ENST00000555541 UGT1A3P35503 534 aa2.08□□□□□ -2.08
SNX6-204ENST00000555541 ACADSBP45954 432 aa2.08□□□□□ -2.08
SNX6-204ENST00000555541 HERV-K104P63124 156 aa2.08□□□□□ -2.08
SNX6-204ENST00000555541 ASIC1P78348 528 aa2.08□□□□□ -2.08
SNX6-204ENST00000555541 ORC2Q13416 577 aaPredicted RBP2.08□□□□□ -2.08
SNX6-204ENST00000555541 GK2Q14410 553 aaPredicted RBP2.08□□□□□ -2.08
SNX6-204ENST00000555541 TYSND1Q2T9J0 566 aa2.08□□□□□ -2.08
SNX6-204ENST00000555541 LGSNQ5TDP6 509 aa2.08□□□□□ -2.08
SNX6-204ENST00000555541 IL34Q6ZMJ4 242 aa2.08□□□□□ -2.08
SNX6-204ENST00000555541 TMEM179BQ7Z7N9 219 aa2.08□□□□□ -2.08
SNX6-204ENST00000555541 MCOLN2Q8IZK6 566 aa2.08□□□□□ -2.08
SNX6-204ENST00000555541 LHX4Q969G2 390 aa2.08□□□□□ -2.08
SNX6-204ENST00000555541 C11orf24Q96F05 449 aaPredicted RBP2.08□□□□□ -2.08
SNX6-204ENST00000555541 DHTKD1Q96HY7 919 aaPredicted RBP2.08□□□□□ -2.08
SNX6-204ENST00000555541 TSSK1BQ9BXA7 367 aa2.08□□□□□ -2.08
SNX6-204ENST00000555541 DCLRE1BQ9H816 532 aa2.08□□□□□ -2.08
SNX6-204ENST00000555541 EXOSC3Q9NQT5 275 aaKnown RBP2.08□□□□□ -2.08
SNX6-204ENST00000555541 VPS54Q9P1Q0 977 aa2.08□□□□□ -2.08
SNX6-204ENST00000555541 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.07□□□□□ -2.08
SNX6-204ENST00000555541 PDLIM1O00151 329 aa2.07□□□□□ -2.08
SNX6-204ENST00000555541 STX6O43752 255 aa2.07□□□□□ -2.08
SNX6-204ENST00000555541 LRP3O75074 770 aa2.07□□□□□ -2.08
SNX6-204ENST00000555541 ECDO95905 644 aaPredicted RBP2.07□□□□□ -2.08
SNX6-204ENST00000555541 PGK1P00558 417 aa2.07□□□□□ -2.08
SNX6-204ENST00000555541 SERPINF2P08697 491 aa2.07□□□□□ -2.08
SNX6-204ENST00000555541 RPS2P15880 293 aaKnown RBP2.07□□□□□ -2.08
SNX6-204ENST00000555541 ACVR1BP36896 505 aa2.07□□□□□ -2.08
SNX6-204ENST00000555541 POU3F4P49335 361 aa2.07□□□□□ -2.08
SNX6-204ENST00000555541 SERPINH1P50454 418 aaKnown RBP2.07□□□□□ -2.08
SNX6-204ENST00000555541 SNU13P55769 128 aaKnown RBP2.07□□□□□ -2.08
SNX6-204ENST00000555541 LINC00315P59091 139 aa2.07□□□□□ -2.08
SNX6-204ENST00000555541 TEFQ10587 303 aa2.07□□□□□ -2.08
SNX6-204ENST00000555541 IL18R1Q13478 541 aa2.07□□□□□ -2.08
SNX6-204ENST00000555541 PRR5LQ6MZQ0 368 aa2.07□□□□□ -2.08
SNX6-204ENST00000555541 UFSP1Q6NVU6 142 aa2.07□□□□□ -2.08
SNX6-204ENST00000555541 SLC22A16Q86VW1 577 aa2.07□□□□□ -2.08
SNX6-204ENST00000555541 PYROXD2Q8N2H3 581 aa2.07□□□□□ -2.08
SNX6-204ENST00000555541 CHCHD4Q8N4Q1 142 aa2.07□□□□□ -2.08
SNX6-204ENST00000555541 BBS1Q8NFJ9 593 aa2.07□□□□□ -2.08
SNX6-204ENST00000555541 ZNF721Q8TF20 911 aa2.07□□□□□ -2.08
SNX6-204ENST00000555541 IL22RA2Q969J5 263 aa2.07□□□□□ -2.08
SNX6-204ENST00000555541 MARC2Q969Z3 335 aa2.07□□□□□ -2.08
SNX6-204ENST00000555541 ACCSQ96QU6 501 aa2.07□□□□□ -2.08
SNX6-204ENST00000555541 TBX15Q96SF7 602 aa2.07□□□□□ -2.08
SNX6-204ENST00000555541 TM2D1Q9BX74 207 aa2.07□□□□□ -2.08
SNX6-204ENST00000555541 TSPYL1Q9H0U9 437 aa2.07□□□□□ -2.08
SNX6-204ENST00000555541 ALG9Q9H6U8 611 aa2.07□□□□□ -2.08
SNX6-204ENST00000555541 CYTL1Q9NRR1 136 aa2.07□□□□□ -2.08
SNX6-204ENST00000555541 NRBP1Q9UHY1 535 aa2.07□□□□□ -2.08
SNX6-204ENST00000555541 FOXA2Q9Y261 457 aaPredicted RBP2.07□□□□□ -2.08
SNX6-204ENST00000555541 IGLV3-16A0A075B6K0 115 aa2.06□□□□□ -2.08
SNX6-204ENST00000555541 A4D1N5 150 aa2.06□□□□□ -2.08
SNX6-204ENST00000555541 GMNNO75496 209 aa2.06□□□□□ -2.08
SNX6-204ENST00000555541 SFTPBP07988 381 aa2.06□□□□□ -2.08
SNX6-204ENST00000555541 VDRP11473 427 aa2.06□□□□□ -2.08
SNX6-204ENST00000555541 VCLP18206 1134 aa2.06□□□□□ -2.08
SNX6-204ENST00000555541 PPOXP50336 477 aa2.06□□□□□ -2.08
SNX6-204ENST00000555541 CAV2P51636 162 aa2.06□□□□□ -2.08
SNX6-204ENST00000555541 PUDPQ08623 228 aa2.06□□□□□ -2.08
SNX6-204ENST00000555541 MPPED2Q15777 294 aa2.06□□□□□ -2.08
SNX6-204ENST00000555541 PRAMEF8Q5VWM4 474 aa2.06□□□□□ -2.08
SNX6-204ENST00000555541 LINC00696Q6ZRV3 163 aa2.06□□□□□ -2.08
SNX6-204ENST00000555541 TRPM8Q7Z2W7 1104 aa2.06□□□□□ -2.08
SNX6-204ENST00000555541 TSEN54Q7Z6J9 526 aaKnown RBP2.06□□□□□ -2.08
SNX6-204ENST00000555541 OR10H4Q8NGA5 316 aa2.06□□□□□ -2.08
SNX6-204ENST00000555541 OR4F17Q8NGA8 305 aa2.06□□□□□ -2.08
SNX6-204ENST00000555541 OR52J3Q8NH60 311 aa2.06□□□□□ -2.08
SNX6-204ENST00000555541 P3H4Q92791 437 aa2.06□□□□□ -2.08
SNX6-204ENST00000555541 RAB39BQ96DA2 213 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms