RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 MAN2A2P49641 1150 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 CRYBA2P53672 197 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 MRPS22P82650 360 aaKnown RBP10.01□□□□□ -0.81
TDP1-211ENST00000555178 VAC14Q08AM6 782 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 Q0VFX4 171 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 MAP4K2Q12851 820 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 SERTAD2Q14140 314 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 PCOLCEQ15113 449 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 SYPL1Q16563 259 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 GCNT6Q5T4J0 391 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 FBXW10Q5XX13 1052 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 GLYATQ6IB77 296 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 DHFR2Q86XF0 187 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 FAM86B1Q8N7N1 296 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 ZSCAN1Q8NBB4 408 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 ZNF721Q8TF20 911 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 PYDC1Q8WXC3 89 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 SLC9A6Q92581 669 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 NCLNQ969V3 563 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 SENP5Q96HI0 755 aaPredicted RBP10.01□□□□□ -0.81
TDP1-211ENST00000555178 OR7D2Q96RA2 312 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 B3GNT4Q9C0J1 378 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 OR8D2Q9GZM6 311 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 THSD1Q9NS62 852 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 NTMQ9P121 344 aa10.01□□□□□ -0.81
TDP1-211ENST00000555178 FAF1Q9UNN5 650 aaPredicted RBP10.01□□□□□ -0.81
TDP1-211ENST00000555178 CNTRLQ7Z7A1 2325 aa10□□□□□ -0.81
TDP1-211ENST00000555178 NKX2-8O15522 239 aa10□□□□□ -0.81
TDP1-211ENST00000555178 GCM2O75603 506 aaPredicted RBP10□□□□□ -0.81
TDP1-211ENST00000555178 CAPNS1P04632 268 aa10□□□□□ -0.81
TDP1-211ENST00000555178 RAB40ALP0C0E4 278 aa10□□□□□ -0.81
TDP1-211ENST00000555178 COX6A1P12074 109 aa10□□□□□ -0.81
TDP1-211ENST00000555178 EMDP50402 254 aa10□□□□□ -0.81
TDP1-211ENST00000555178 BNIP2Q12982 314 aa10□□□□□ -0.81
TDP1-211ENST00000555178 FADDQ13158 208 aa10□□□□□ -0.81
TDP1-211ENST00000555178 DUSP5Q16690 384 aa10□□□□□ -0.81
TDP1-211ENST00000555178 CPEB2Q7Z5Q1 589 aaKnown RBP10□□□□□ -0.81
TDP1-211ENST00000555178 SPATA24Q86W54 205 aa10□□□□□ -0.81
TDP1-211ENST00000555178 ZNF615Q8N8J6 731 aa10□□□□□ -0.81
TDP1-211ENST00000555178 OR11G2Q8NGC1 345 aa10□□□□□ -0.81
TDP1-211ENST00000555178 SLC2A12Q8TD20 617 aa10□□□□□ -0.81
TDP1-211ENST00000555178 SLC38A5Q8WUX1 472 aa10□□□□□ -0.81
TDP1-211ENST00000555178 XAGE5Q8WWM1 108 aa10□□□□□ -0.81
TDP1-211ENST00000555178 PIK3R3Q92569 461 aa10□□□□□ -0.81
TDP1-211ENST00000555178 CDS1Q92903 461 aa10□□□□□ -0.81
TDP1-211ENST00000555178 NXPE2Q96DL1 559 aa10□□□□□ -0.81
TDP1-211ENST00000555178 LMF1Q96S06 567 aa10□□□□□ -0.81
TDP1-211ENST00000555178 RUBCNLQ9H714 662 aa10□□□□□ -0.81
TDP1-211ENST00000555178 CORO2BQ9UQ03 480 aa10□□□□□ -0.81
TDP1-211ENST00000555178 A0A087WV62 115 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 H0Y3Z8 333 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 GSTA4O15217 222 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 MAN1A2O60476 641 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 ZNF354AO60765 605 aaPredicted RBP9.99□□□□□ -0.81
TDP1-211ENST00000555178 OPN1SWP03999 348 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 IGKV3-11P04433 115 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 ARAFP10398 606 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 LIPCP11150 499 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 BMP2P12643 396 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 PRIM2P49643 509 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 ZNF155Q12901 538 aaPredicted RBP9.99□□□□□ -0.81
TDP1-211ENST00000555178 SCARB2Q14108 478 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 ELAVL1Q15717 326 aaKnown RBP9.99□□□□□ -0.81
TDP1-211ENST00000555178 LRRC23Q53EV4 343 aaPredicted RBP9.99□□□□□ -0.81
TDP1-211ENST00000555178 CCNJQ5T5M9 372 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 LCN8Q6JVE9 175 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 PAPD4Q6PIY7 484 aaKnown RBP9.99□□□□□ -0.81
TDP1-211ENST00000555178 ANKFN1Q8N957 763 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 APCDD1LQ8NCL9 501 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 C16orf52Q8NHV5 167 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 SLC26A7Q8TE54 656 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 ADAMTS17Q8TE56 1095 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 MOAP1Q96BY2 351 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 SLC35A4Q96G79 324 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 TMEM19Q96HH6 336 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 RSPO3Q9BXY4 272 aaPredicted RBP9.99□□□□□ -0.81
TDP1-211ENST00000555178 OR10A5Q9H207 317 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 ACTR3BQ9P1U1 418 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 CLCA3PQ9Y6N3 262 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 NBEAQ8NFP9 2946 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 TNRC6AQ8NDV7 1962 aaKnown RBP9.99□□□□□ -0.81
TDP1-211ENST00000555178 LOC102723996A0A087X1L8 192 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 IGHV1-45A0A0A0MS14 117 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 TCRBV5S2A0A599 114 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 CDC14CA4D256 554 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 ZIC2O95409 532 aaPredicted RBP9.99□□□□□ -0.81
TDP1-211ENST00000555178 CHRM4P08173 479 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 KHKP50053 298 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 SLC37A1P57057 533 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 RPS15P62841 145 aaKnown RBP9.99□□□□□ -0.81
TDP1-211ENST00000555178 CDK6Q00534 326 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 FUT7Q11130 342 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 ATP1A4Q13733 1029 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 DESI1Q6ICB0 168 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 NPSR1Q6W5P4 371 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 C9orf40Q8IXQ3 194 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 C11orf65Q8NCR3 313 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 OR4N2Q8NGD1 307 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 THAP3Q8WTV1 239 aaPredicted RBP9.99□□□□□ -0.81
TDP1-211ENST00000555178 GATA6Q92908 595 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms