RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 TFAP2BQ92481 460 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 SLC2A6Q9UGQ3 507 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 GXYLT2A0PJZ3 443 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 PMM2O15305 246 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 IFNA17P01571 189 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 ACY1Q03154 408 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 MEP1AQ16819 746 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 ZNF630Q2M218 657 aaPredicted RBP6.57□□□□□ -1.36
SYNE2-216ENST00000555002 SLC35G1Q2M3R5 365 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 ZSWIM9Q86XI8 627 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 OR2T33Q8NG76 320 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 SLC25A18Q9H1K4 315 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 ZNF286AQ9HBT8 521 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 HS3ST4Q9Y661 456 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 C17orf113A0A1B0GUU1 675 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 A0A1W2PQU0 124 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 SYT7O43581 403 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 AP1G1O43747 822 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 SNAPC5O75971 98 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 EOMESO95936 686 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 SERPINA5P05154 406 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 TUBA4AP68366 448 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 GBX1Q14549 363 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 SF3B4Q15427 424 aaKnown RBP eCLIP6.57□□□□□ -1.36
SYNE2-216ENST00000555002 TRAM1Q15629 374 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 ECM1Q16610 540 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 MANEAQ5SRI9 462 aa6.57□□□□□ -1.36
SYNE2-216ENST00000555002 C12orf76Q8N812 135 aaPredicted RBP6.57□□□□□ -1.36
SYNE2-216ENST00000555002 APOBEC3BQ9UH17 382 aaKnown RBP6.57□□□□□ -1.36
SYNE2-216ENST00000555002 LOC100130705A0A1B0GUX0 176 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 CDC14CA4D256 554 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 FSCN2O14926 492 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 KIAA0355O15063 1070 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 ANGPTL7O43827 346 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 ZNF763Q0D2J5 394 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 ACSBG2Q5FVE4 666 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 KIAA0930Q6ICG6 404 aaPredicted RBP6.56□□□□□ -1.36
SYNE2-216ENST00000555002 TRMT10BQ6PF06 316 aaKnown RBP6.56□□□□□ -1.36
SYNE2-216ENST00000555002 CARM1Q86X55 608 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 PRR22Q8IZ63 422 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 OR11L1Q8NGX0 322 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 FN3KRPQ9HA64 309 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 KCNK12Q9HB15 430 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 PLCXD1Q9NUJ7 323 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 FAIMQ9NVQ4 179 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 MEGF6O75095 1541 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 TOR1AO14656 332 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 FBXL22Q6P050 247 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 ZNF852Q6ZMS4 543 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 ZNF765Q7L2R6 523 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 SYT14Q8NB59 555 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 OR9A2Q8NGT5 310 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 HSFX1Q9UBD0 423 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 MCTS1Q9ULC4 181 aaKnown RBP6.56□□□□□ -1.36
SYNE2-216ENST00000555002 J3KR12 359 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 SLITRK5O94991 958 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 RAB6AP20340 208 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 GPR143P51810 404 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 KCNJ11Q14654 390 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 FAM182AQ5T1J6 154 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 FAM180BQ6P0A1 224 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 CLEC17AQ6ZS10 378 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 IL17RDQ8NFM7 739 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 DZANK1Q9NVP4 752 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 SIDT1Q9NXL6 827 aaKnown RBP6.56□□□□□ -1.36
SYNE2-216ENST00000555002 PISDQ9UG56 409 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 FMO6PO60774 539 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 FGF18O76093 207 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 MAOAP21397 527 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 FKBP1AP62942 108 aaKnown RBP6.56□□□□□ -1.36
SYNE2-216ENST00000555002 P2RY14Q15391 338 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 TMEM205Q6UW68 189 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 KLBQ86Z14 1044 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 DHX33Q9H6R0 707 aaKnown RBP6.56□□□□□ -1.36
SYNE2-216ENST00000555002 GPR160Q9UJ42 338 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 VWDEQ8N2E2 1590 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 A0A1W2PQ09 198 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 FAAHO00519 579 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 CELP19835 753 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 ARL2P36404 184 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 IL17AQ16552 155 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 CREB3L2Q70SY1 520 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 ZNF767PQ75MW2 155 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 HS3ST5Q8IZT8 346 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 FAM83FQ8NEG4 500 aaPredicted RBP6.56□□□□□ -1.36
SYNE2-216ENST00000555002 BPIFCQ8NFQ6 507 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 H1FXQ92522 213 aaKnown RBP6.56□□□□□ -1.36
SYNE2-216ENST00000555002 DPH2Q9BQC3 489 aaPredicted RBP6.56□□□□□ -1.36
SYNE2-216ENST00000555002 EBF2Q9HAK2 575 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 CUTCQ9NTM9 273 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 DVL2O14641 736 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 CREG1O75629 220 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 MPIG6BO95866 241 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 SLURP2P0DP57 97 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 BMP6P22004 513 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 DAOAP59103 153 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 AKR1C1Q04828 323 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 SMAD2Q15796 467 aaKnown RBP6.56□□□□□ -1.36
SYNE2-216ENST00000555002 ELP2Q6IA86 826 aa6.56□□□□□ -1.36
SYNE2-216ENST00000555002 C22orf42Q6IC83 251 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms