RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 PRPH2P23942 346 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 ABCD3P28288 659 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 ADH7P40394 386 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 CASP3P42574 277 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 C2orf80Q0P641 193 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 PLCXD2Q0VAA5 305 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 MGAT2Q10469 447 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 MAP4K2Q12851 820 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 MYBPHQ13203 477 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 KIAA0040Q15053 153 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 HYAL4Q2M3T9 481 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 EIPR1Q53HC9 387 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 WIPI1Q5MNZ9 446 aaPredicted RBP11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 CEP85LQ5SZL2 805 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 ANGPTL8Q6UXH0 198 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 YRDCQ86U90 279 aaKnown RBP11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 LIX1LQ8IVB5 337 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.28□□□□□ -0.65e-6■■■■■ 56.5
CCDC85C-202ENST00000554877 C16orf78Q8WTQ4 265 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 OMA1Q96E52 524 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 CNRIP1Q96F85 164 aaPredicted RBP11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 LCORQ96JN0 433 aaPredicted RBP11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 FCRL1Q96LA6 429 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 BBS4Q96RK4 519 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 NODALQ96S42 347 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 SPOCK3Q9BQ16 436 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 TRMOQ9BU70 441 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 GALNT9Q9HCQ5 603 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 GIMAP4Q9NUV9 329 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 KLRF1Q9NZS2 232 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 Q9UFV3 132 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 MCM8Q9UJA3 840 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 MID2Q9UJV3 735 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 MAPRE3Q9UPY8 281 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 CFL2Q9Y281 166 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 FIS1Q9Y3D6 152 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 EXPH5Q8NEV8 1989 aa11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 NCOA6Q14686 2063 aaPredicted RBP11.28□□□□□ -0.6
CCDC85C-202ENST00000554877 RGS16O15492 202 aaPredicted RBP11.27□□□□□ -0.61
CCDC85C-202ENST00000554877 WDR1O75083 606 aa11.27□□□□□ -0.61
CCDC85C-202ENST00000554877 TRIM3O75382 744 aaPredicted RBP11.27□□□□□ -0.61
CCDC85C-202ENST00000554877 PPM1BO75688 479 aa11.27□□□□□ -0.61
CCDC85C-202ENST00000554877 SNX4O95219 450 aa11.27□□□□□ -0.61
CCDC85C-202ENST00000554877 CBX7O95931 251 aa11.27□□□□□ -0.61
CCDC85C-202ENST00000554877 ELAVL4P26378 380 aaKnown RBP11.27□□□□□ -0.61
CCDC85C-202ENST00000554877 AGFG1P52594 562 aaKnown RBP11.27□□□□□ -0.61
CCDC85C-202ENST00000554877 TRA2BP62995 288 aaKnown RBP11.27□□□□□ -0.61
CCDC85C-202ENST00000554877 SRYQ05066 204 aa11.27□□□□□ -0.61
CCDC85C-202ENST00000554877 TBCELQ5QJ74 424 aa11.27□□□□□ -0.61
CCDC85C-202ENST00000554877 SH2D4BQ5SQS7 431 aa11.27□□□□□ -0.61
CCDC85C-202ENST00000554877 KANK2Q63ZY3 851 aa11.27□□□□□ -0.61
CCDC85C-202ENST00000554877 Q6ZSR9 355 aa11.27□□□□□ -0.61
CCDC85C-202ENST00000554877 ULK2Q8IYT8 1036 aa11.27□□□□□ -0.61
CCDC85C-202ENST00000554877 GBP7Q8N8V2 638 aaPredicted RBP11.27□□□□□ -0.61
CCDC85C-202ENST00000554877 OR1J4Q8NGS1 313 aa11.27□□□□□ -0.61
CCDC85C-202ENST00000554877 OR9A2Q8NGT5 310 aa11.27□□□□□ -0.61
CCDC85C-202ENST00000554877 OR2T11Q8NH01 316 aa11.27□□□□□ -0.61
CCDC85C-202ENST00000554877 TMBIM1Q969X1 311 aa11.27□□□□□ -0.61
CCDC85C-202ENST00000554877 ANGPTL4Q9BY76 406 aa11.27□□□□□ -0.61
CCDC85C-202ENST00000554877 TMBIM4Q9HC24 238 aa11.27□□□□□ -0.61
CCDC85C-202ENST00000554877 NPDC1Q9NQX5 325 aaPredicted RBP11.27□□□□□ -0.61
CCDC85C-202ENST00000554877 PRODH2Q9UF12 536 aa11.27□□□□□ -0.61
CCDC85C-202ENST00000554877 EXO1Q9UQ84 846 aaKnown RBP11.27□□□□□ -0.61
CCDC85C-202ENST00000554877 DNAJC15Q9Y5T4 150 aa11.27□□□□□ -0.61
CCDC85C-202ENST00000554877 MYO9AB2RTY4 2548 aa11.27□□□□□ -0.61
CCDC85C-202ENST00000554877 KDM4EB2RXH2 506 aaPredicted RBP11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 ICOSLGO75144 302 aa11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 ATP1B1P05026 303 aa11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 UROSP10746 265 aa11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 DRD2P14416 443 aa11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 GABRA1P14867 456 aa11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 TIA1P31483 386 aaKnown RBP eCLIP11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 UQCRC1P31930 480 aa11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 KRT20P35900 424 aa11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 SERPINB4P48594 390 aa11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 WDR4P57081 412 aaKnown RBP11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 CASP8Q14790 479 aa11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 HEPACAMQ14CZ8 416 aa11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 PRSS53Q2L4Q9 553 aa11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 SPIN4Q56A73 249 aa11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 ARL13AQ5H913 290 aaPredicted RBP11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 CLEC6AQ6EIG7 209 aa11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 OR5M10Q6IEU7 315 aa11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 ZCCHC23Q6ZST2 131 aa11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 NUP54Q7Z3B4 507 aa11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 TMEM200AQ86VY9 491 aa11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 ZNF681Q96N22 645 aa11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 TRIB1Q96RU8 372 aa11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 TIMP4Q99727 224 aa11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 ZNF559Q9BR84 538 aa11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 C20orf27Q9GZN8 174 aa11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 ENKD1Q9H0I2 346 aa11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 ACKR4Q9NPB9 350 aa11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 SERHLQ9NQF3 203 aa11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 QPCTLQ9NXS2 382 aa11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 HAO1Q9UJM8 370 aa11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 POLR3HQ9Y535 204 aaPredicted RBP11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 PTGDR2Q9Y5Y4 395 aa11.26□□□□□ -0.61
CCDC85C-202ENST00000554877 ABCA12Q86UK0 2595 aa11.25□□□□□ -0.61
CCDC85C-202ENST00000554877 ANKRD33BA6NCL7 494 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms