RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 NUP214P35658 2090 aaPredicted RBP11.12□□□□□ -0.63
MTHFD1-207ENST00000554677 A0A1W2PPR1 153 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 TUBAL3A6NHL2 446 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 A8MT66 165 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 ACOX3O15254 700 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 SMIM24O75264 130 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 NME6O75414 186 aaPredicted RBP11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 CBR3O75828 277 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 ATE1O95260 518 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 ACTL6AO96019 429 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 RHOXF2BP0C7M4 288 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 CHN1P15882 459 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 PCSK2P16519 638 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 KRT15P19012 456 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 CNTFP26441 200 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 PHBP35232 272 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 OPRM1P35372 400 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 DEKP35659 375 aaKnown RBP11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 HSD17B3P37058 310 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 GFRA1P56159 465 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 RAE1P78406 368 aaKnown RBP11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 MRPS35P82673 323 aaKnown RBP11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 SF3B4Q15427 424 aaKnown RBP eCLIP11.11□□□□□ -0.632e-7■■■□□ 19.1
MTHFD1-207ENST00000554677 TCHHL1Q5QJ38 904 aaPredicted RBP11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 KIF18BQ86Y91 864 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 TRIM42Q8IWZ5 723 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 C1orf52Q8N6N3 182 aaKnown RBP11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 CHDHQ8NE62 594 aaPredicted RBP11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 GOT1L1Q8NHS2 421 aaPredicted RBP11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 RNF138Q8WVD3 245 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 SELENOMQ8WWX9 145 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 LRRC46Q96FV0 321 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 ALPK1Q96QP1 1244 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 HBEGFQ99075 208 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 PAFAH2Q99487 392 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 MRPL57Q9BQC6 102 aaKnown RBP11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 OSBPL11Q9BXB4 747 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 ELOVL6Q9H5J4 265 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 ANKRA2Q9H9E1 313 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 SERHLQ9NQF3 203 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 EHD3Q9NZN3 535 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 DMGDHQ9UI17 866 aaKnown RBP11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 MAPRE3Q9UPY8 281 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 CFL2Q9Y281 166 aa11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 GPR55Q9Y2T6 319 aaPredicted RBP11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.11□□□□□ -0.63
MTHFD1-207ENST00000554677 GOLGA6L10A6NI86 522 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 ZIC3O60481 467 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 GUCY1B2O75343 617 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 OR4F21O95013 312 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 RCBTB2O95199 551 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 OTCP00480 354 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 INHBAP08476 426 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 TMIGD3P0DMS9 266 aaPredicted RBP11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 CT45A8P0DMV1 189 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 CT45A9P0DMV2 189 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 ECHS1P30084 290 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 STARP49675 285 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 SERPINB9P50453 376 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 LHX2P50458 406 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 TRA2BP62995 288 aaKnown RBP11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 SORDQ00796 357 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 HMGCS1Q01581 520 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 TSNAXIP1Q2TAA8 658 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 UNC50Q53HI1 259 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 CT45A2Q5DJT8 189 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 ZNF628Q5EBL2 1059 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 C8orf74Q6P047 294 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 PAMR1Q6UXH9 720 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 CCDC116Q8IYX3 515 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 RDH11Q8TC12 318 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 ZNF675Q8TD23 568 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 TMBIM1Q969X1 311 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 KLHL29Q96CT2 875 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 MRPL46Q9H2W6 279 aaKnown RBP11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 TRPS1Q9UHF7 1281 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 FBXL2Q9UKC9 423 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 PSME2Q9UL46 239 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 SNX6Q9UNH7 406 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 TLN2Q9Y4G6 2542 aa11.1□□□□□ -0.63
MTHFD1-207ENST00000554677 CSPG4Q6UVK1 2322 aa11.09□□□□□ -0.63
MTHFD1-207ENST00000554677 NSD1Q96L73 2696 aaPredicted RBP11.09□□□□□ -0.63
MTHFD1-207ENST00000554677 PRAMEF25A6NGN4 478 aa11.09□□□□□ -0.63
MTHFD1-207ENST00000554677 FRG2CA6NGY1 282 aa11.09□□□□□ -0.63
MTHFD1-207ENST00000554677 OR6C70A6NIJ9 312 aa11.09□□□□□ -0.63
MTHFD1-207ENST00000554677 TRIM49D1C9J1S8 452 aa11.09□□□□□ -0.63
MTHFD1-207ENST00000554677 EEF1E1-BLOC1S5C9J1V9 151 aa11.09□□□□□ -0.63
MTHFD1-207ENST00000554677 MANBAO00462 879 aa11.09□□□□□ -0.63
MTHFD1-207ENST00000554677 EEF1E1O43324 174 aaKnown RBP11.09□□□□□ -0.63
MTHFD1-207ENST00000554677 TSPAN2O60636 221 aa11.09□□□□□ -0.63
MTHFD1-207ENST00000554677 HRGP04196 525 aa11.09□□□□□ -0.63
MTHFD1-207ENST00000554677 CYP4B1P13584 511 aa11.09□□□□□ -0.63
MTHFD1-207ENST00000554677 GCAP28676 217 aa11.09□□□□□ -0.63
MTHFD1-207ENST00000554677 GAS1P54826 345 aa11.09□□□□□ -0.63
MTHFD1-207ENST00000554677 DCAF7P61962 342 aa11.09□□□□□ -0.63
MTHFD1-207ENST00000554677 SRYQ05066 204 aa11.09□□□□□ -0.63
MTHFD1-207ENST00000554677 CLCQ05315 142 aa11.09□□□□□ -0.63
MTHFD1-207ENST00000554677 PLCXD2Q0VAA5 305 aa11.09□□□□□ -0.63
MTHFD1-207ENST00000554677 RCAN2Q14206 197 aa11.09□□□□□ -0.63
MTHFD1-207ENST00000554677 PRSS53Q2L4Q9 553 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms