RNA–Protein interactions for RNA: ENST00000554170.1

XRCC3-206, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-206ENST00000554170 PRPS1L1P21108 318 aa11.85□□□□□ -0.51
XRCC3-206ENST00000554170 S1PR1P21453 382 aa11.85□□□□□ -0.51
XRCC3-206ENST00000554170 PTGER1P34995 402 aa11.85□□□□□ -0.51
XRCC3-206ENST00000554170 GPC1P35052 558 aa11.85□□□□□ -0.51
XRCC3-206ENST00000554170 SOX3P41225 446 aa11.85□□□□□ -0.51
XRCC3-206ENST00000554170 NR0B1P51843 470 aaKnown RBP11.85□□□□□ -0.51
XRCC3-206ENST00000554170 MANFP55145 182 aaKnown RBP11.85□□□□□ -0.51
XRCC3-206ENST00000554170 DCAF7P61962 342 aa11.85□□□□□ -0.51
XRCC3-206ENST00000554170 MRPS35P82673 323 aaKnown RBP11.85□□□□□ -0.51
XRCC3-206ENST00000554170 PDE7AQ13946 482 aa11.85□□□□□ -0.51
XRCC3-206ENST00000554170 PTGR1Q14914 329 aa11.85□□□□□ -0.51
XRCC3-206ENST00000554170 EXOSC7Q15024 291 aaKnown RBP11.85□□□□□ -0.51
XRCC3-206ENST00000554170 PRSS53Q2L4Q9 553 aa11.85□□□□□ -0.51
XRCC3-206ENST00000554170 CPTPQ5TA50 214 aa11.85□□□□□ -0.51
XRCC3-206ENST00000554170 NXNQ6DKJ4 435 aa11.85□□□□□ -0.51
XRCC3-206ENST00000554170 ANKRD26P1Q6NSI1 321 aa11.85□□□□□ -0.51
XRCC3-206ENST00000554170 XKRXQ6PP77 449 aa11.85□□□□□ -0.51
XRCC3-206ENST00000554170 SPATA19Q7Z5L4 167 aa11.85□□□□□ -0.51
XRCC3-206ENST00000554170 ZNF295-AS1Q8N0V1 137 aa11.85□□□□□ -0.51
XRCC3-206ENST00000554170 ARFGAP2Q8N6H7 521 aa11.85□□□□□ -0.51
XRCC3-206ENST00000554170 DNAJB8Q8NHS0 232 aa11.85□□□□□ -0.51
XRCC3-206ENST00000554170 C16orf52Q8NHV5 167 aa11.85□□□□□ -0.51
XRCC3-206ENST00000554170 SCMH1Q96GD3 660 aa11.85□□□□□ -0.51
XRCC3-206ENST00000554170 SGCZQ96LD1 299 aa11.85□□□□□ -0.51
XRCC3-206ENST00000554170 MAGEB18Q96M61 343 aa11.85□□□□□ -0.51
XRCC3-206ENST00000554170 AMDHD1Q96NU7 426 aa11.85□□□□□ -0.51
XRCC3-206ENST00000554170 GLIPR2Q9H4G4 154 aa11.85□□□□□ -0.51
XRCC3-206ENST00000554170 TAS2R9Q9NYW1 312 aa11.85□□□□□ -0.51
XRCC3-206ENST00000554170 SH3BGRL2Q9UJC5 107 aa11.85□□□□□ -0.51
XRCC3-206ENST00000554170 KLF13Q9Y2Y9 288 aaPredicted RBP11.85□□□□□ -0.51
XRCC3-206ENST00000554170 A0A087WV62 115 aa11.84□□□□□ -0.51
XRCC3-206ENST00000554170 KLRC4-KLRK1H3BQV0 150 aa11.84□□□□□ -0.51
XRCC3-206ENST00000554170 SDHDO14521 159 aa11.84□□□□□ -0.51
XRCC3-206ENST00000554170 PLOD3O60568 738 aa11.84□□□□□ -0.51
XRCC3-206ENST00000554170 OR6B1O95007 311 aa11.84□□□□□ -0.51
XRCC3-206ENST00000554170 CBX7O95931 251 aa11.84□□□□□ -0.51
XRCC3-206ENST00000554170 GPX3P22352 226 aa11.84□□□□□ -0.51
XRCC3-206ENST00000554170 SSTR2P30874 369 aa11.84□□□□□ -0.51
XRCC3-206ENST00000554170 TMED10P49755 219 aaKnown RBP11.84□□□□□ -0.51
XRCC3-206ENST00000554170 CLDN8P56748 225 aa11.84□□□□□ -0.51
XRCC3-206ENST00000554170 RBPJQ06330 500 aa11.84□□□□□ -0.51
XRCC3-206ENST00000554170 HSPB3Q12988 150 aa11.84□□□□□ -0.51
XRCC3-206ENST00000554170 TESK1Q15569 626 aa11.84□□□□□ -0.51
XRCC3-206ENST00000554170 TMEM107Q6UX40 140 aa11.84□□□□□ -0.51
XRCC3-206ENST00000554170 RTL4Q6ZR62 310 aa11.84□□□□□ -0.51
XRCC3-206ENST00000554170 LARP4Q71RC2 724 aaKnown RBP eCLIP11.84□□□□□ -0.51
XRCC3-206ENST00000554170 GALNTL5Q7Z4T8 443 aa11.84□□□□□ -0.51
XRCC3-206ENST00000554170 C17orf47Q8NEP4 570 aa11.84□□□□□ -0.51
XRCC3-206ENST00000554170 CKAP2Q8WWK9 683 aa11.84□□□□□ -0.51
XRCC3-206ENST00000554170 MAGED4Q96JG8 741 aa11.84□□□□□ -0.51
XRCC3-206ENST00000554170 DPY30Q9C005 99 aa11.84□□□□□ -0.51
XRCC3-206ENST00000554170 MED4Q9NPJ6 270 aa11.84□□□□□ -0.51
XRCC3-206ENST00000554170 ACSS1Q9NUB1 689 aaPredicted RBP11.84□□□□□ -0.51
XRCC3-206ENST00000554170 DDX18Q9NVP1 670 aaKnown RBP11.84□□□□□ -0.51
XRCC3-206ENST00000554170 GOLGA8QA0A0J9YX86 632 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 A0A1W2PRB8 838 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 GOLGA8OA6NCC3 632 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 GOLGA8NF8WBI6 632 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 PLOD2O00469 737 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 NME2P1O60361 137 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 SLC19A2O60779 497 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 NADKO95544 446 aaPredicted RBP11.83□□□□□ -0.52
XRCC3-206ENST00000554170 P04436 131 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 IFI6P09912 130 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 AGAP20933 346 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 NME2P22392 152 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 EPHA3P29320 983 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 MC3RP41968 323 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 PPICP45877 212 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 EMDP50402 254 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 DIO3P55073 304 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 CASP6P55212 293 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 ADORA2A-AS1P86434 159 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 SRSF11Q05519 484 aaKnown RBP11.83□□□□□ -0.52
XRCC3-206ENST00000554170 RPS6KA2Q15349 733 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 KRTAP21-3Q3LHN1 58 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 LSM12Q3MHD2 195 aaKnown RBP11.83□□□□□ -0.52
XRCC3-206ENST00000554170 ZNF385BQ569K4 471 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 OGFOD2Q6N063 350 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 SPNS3Q6ZMD2 512 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 ZNF551Q7Z340 670 aaPredicted RBP11.83□□□□□ -0.52
XRCC3-206ENST00000554170 ZNF441Q8N8Z8 693 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 GOLM1Q8NBJ4 401 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 OR7G2Q8NG99 324 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 OR7A2PQ8NGA2 310 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 ADIPOR1Q96A54 375 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 CIDECQ96AQ7 238 aaPredicted RBP11.83□□□□□ -0.52
XRCC3-206ENST00000554170 SPACA9Q96E40 222 aaPredicted RBP11.83□□□□□ -0.52
XRCC3-206ENST00000554170 ELP4Q96EB1 424 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 HSPBAP1Q96EW2 488 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 LCORQ96JN0 433 aaPredicted RBP11.83□□□□□ -0.52
XRCC3-206ENST00000554170 ITPAQ9BY32 194 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 HES7Q9BYE0 225 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 BHLHE41Q9C0J9 482 aaPredicted RBP11.83□□□□□ -0.52
XRCC3-206ENST00000554170 WDR55Q9H6Y2 383 aaPredicted RBP11.83□□□□□ -0.52
XRCC3-206ENST00000554170 C3orf14Q9HBI5 128 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 NPFFR2Q9Y5X5 522 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 USH1CQ9Y6N9 552 aa11.83□□□□□ -0.52
XRCC3-206ENST00000554170 TP53I11O14683 189 aa11.82□□□□□ -0.52
XRCC3-206ENST00000554170 ACOX3O15254 700 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms