RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 FUT5Q11128 374 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 LASP1Q14847 261 aaKnown RBP10.14□□□□□ -0.79
PABPN1-203ENST00000553960 NKG7Q16617 165 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.14□□□□□ -0.79
PABPN1-203ENST00000553960 TRMT12Q53H54 448 aaKnown RBP10.14□□□□□ -0.79
PABPN1-203ENST00000553960 SNAP47Q5SQN1 464 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 STPG1Q5TH74 334 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 FAM111BQ6SJ93 734 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 B3GNT8Q7Z7M8 397 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 GRAMD2AQ8IUY3 354 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 SLC16A11Q8NCK7 471 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 TOR1AIP2Q8NFQ8 470 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 OR5AK3PQ8NH89 298 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 STT3BQ8TCJ2 826 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 ADAMTS15Q8TE58 950 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 GEMIN6Q8WXD5 167 aaKnown RBP10.14□□□□□ -0.79
PABPN1-203ENST00000553960 TP53INP1Q96A56 240 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 SLC35A4Q96G79 324 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 TMEM19Q96HH6 336 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 DEPDC7Q96QD5 511 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 TAAR9Q96RI9 348 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 SDF2Q99470 211 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 SPSB2Q99619 263 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 PKP2Q99959 881 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 PINK1Q9BXM7 581 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 VN1R1Q9GZP7 353 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 ZMYND15Q9H091 742 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 NTN4Q9HB63 628 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 NECTIN3Q9NQS3 549 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 OCIAD1Q9NX40 245 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 USE1Q9NZ43 259 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 NCDNQ9UBB6 729 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 DHCR7Q9UBM7 475 aaKnown RBP10.14□□□□□ -0.79
PABPN1-203ENST00000553960 KCND3Q9UK17 655 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 GPR55Q9Y2T6 319 aaPredicted RBP10.14□□□□□ -0.79
PABPN1-203ENST00000553960 PCDHGA10Q9Y5H3 936 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 HEMK1Q9Y5R4 338 aaPredicted RBP10.14□□□□□ -0.79
PABPN1-203ENST00000553960 WDR87Q6ZQQ6 2873 aa10.14□□□□□ -0.79
PABPN1-203ENST00000553960 C4orf47A7E2U8 309 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 EFCAB7A8K855 629 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 C5orf58C9J3I9 102 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 ACOX3O15254 700 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 OR10H2O60403 315 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 BRINP1O60477 761 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 FMO6PO60774 539 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 STX11O75558 287 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 DNAJB5O75953 348 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 TIAF1O95411 115 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 DDAH2O95865 285 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 LGI1O95970 557 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 HPRP00739 348 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 IGHEP01854 428 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 CLPSP04118 112 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 KLK3P07288 261 aaPredicted RBP10.13□□□□□ -0.79
PABPN1-203ENST00000553960 ALOX5P09917 674 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 CT62P0C5K7 136 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 OR12D1P0DN82 309 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 NAGAP17050 411 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 RHCEP18577 417 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 NT5EP21589 574 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 ALAS2P22557 587 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 CD82P27701 267 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 OR1D4P47884 311 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 BTG2P78543 158 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 MAT1AQ00266 395 aaKnown RBP10.13□□□□□ -0.79
PABPN1-203ENST00000553960 LTB4RQ15722 352 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 IFI44LQ53G44 452 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 DCAF12Q5T6F0 453 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 PHF19Q5T6S3 580 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 WLSQ5T9L3 541 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 ARHGAP40Q5TG30 622 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 RNF220Q5VTB9 566 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 HMBOX1Q6NT76 420 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 TSEN54Q7Z6J9 526 aaKnown RBP10.13□□□□□ -0.79
PABPN1-203ENST00000553960 TMPRSS12Q86WS5 348 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 CMIPQ8IY22 773 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 KBTBD2Q8IY47 623 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 ZSCAN1Q8NBB4 408 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 NFAM1Q8NET5 270 aaPredicted RBP10.13□□□□□ -0.79
PABPN1-203ENST00000553960 NFKBIDQ8NI38 313 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 PNPT1Q8TCS8 783 aaKnown RBP10.13□□□□□ -0.79
PABPN1-203ENST00000553960 MAL2Q969L2 176 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 COL26A1Q96A83 441 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 SLC47A1Q96FL8 570 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 SENP5Q96HI0 755 aaPredicted RBP10.13□□□□□ -0.79
PABPN1-203ENST00000553960 PTCHD1Q96NR3 888 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 ZNF184Q99676 751 aaPredicted RBP10.13□□□□□ -0.79
PABPN1-203ENST00000553960 C9orf16Q9BUW7 83 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 KLHL4Q9C0H6 718 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 GABARAPL1Q9H0R8 117 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 ANKRD19PQ9H560 264 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 TRIM45Q9H8W5 580 aaPredicted RBP10.13□□□□□ -0.79
PABPN1-203ENST00000553960 HHATLQ9HCP6 504 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 IRAK4Q9NWZ3 460 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 KIF26BQ2KJY2 2108 aa10.13□□□□□ -0.79
PABPN1-203ENST00000553960 SCN2AQ99250 2005 aa10.12□□□□□ -0.79
PABPN1-203ENST00000553960 USP34Q70CQ2 3546 aa10.12□□□□□ -0.79
PABPN1-203ENST00000553960 NINQ8N4C6 2090 aa10.12□□□□□ -0.79
PABPN1-203ENST00000553960 AGAP5A6NIR3 686 aa10.12□□□□□ -0.79
PABPN1-203ENST00000553960 H0Y3Z8 333 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms