RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 SLC34A3Q8N130 599 aa16.65■□□□□ 0.26
SHMT2-206ENST00000553529 OR10Q1Q8NGQ4 319 aa16.65■□□□□ 0.26
SHMT2-206ENST00000553529 NEIL3Q8TAT5 605 aa16.65■□□□□ 0.26
SHMT2-206ENST00000553529 ZNF675Q8TD23 568 aa16.65■□□□□ 0.26
SHMT2-206ENST00000553529 EFHD2Q96C19 240 aaPredicted RBP16.65■□□□□ 0.26
SHMT2-206ENST00000553529 VSTM2LQ96N03 204 aa16.65■□□□□ 0.26
SHMT2-206ENST00000553529 RTN4RQ9BZR6 473 aa16.65■□□□□ 0.26
SHMT2-206ENST00000553529 GLIPR2Q9H4G4 154 aa16.65■□□□□ 0.26
SHMT2-206ENST00000553529 SERHLQ9NQF3 203 aa16.65■□□□□ 0.26
SHMT2-206ENST00000553529 BAIAP2L1Q9UHR4 511 aa16.65■□□□□ 0.26
SHMT2-206ENST00000553529 GPR55Q9Y2T6 319 aaPredicted RBP16.65■□□□□ 0.26
SHMT2-206ENST00000553529 C15orf41Q9Y2V0 281 aa16.65■□□□□ 0.26
SHMT2-206ENST00000553529 CENPEQ02224 2701 aa16.65■□□□□ 0.26
SHMT2-206ENST00000553529 MYO1GB0I1T2 1018 aa16.64■□□□□ 0.25
SHMT2-206ENST00000553529 TP53I11O14683 189 aa16.64■□□□□ 0.25
SHMT2-206ENST00000553529 AKAP10O43572 662 aa16.64■□□□□ 0.25
SHMT2-206ENST00000553529 SUSD5O60279 629 aa16.64■□□□□ 0.25
SHMT2-206ENST00000553529 ICOSLGO75144 302 aa16.64■□□□□ 0.25
SHMT2-206ENST00000553529 NUDT17P0C025 328 aa16.64■□□□□ 0.25
SHMT2-206ENST00000553529 DRD2P14416 443 aa16.64■□□□□ 0.25
SHMT2-206ENST00000553529 MASP1P48740 699 aa16.64■□□□□ 0.25
SHMT2-206ENST00000553529 NCBP2P52298 156 aaKnown RBP eCLIP16.64■□□□□ 0.25
SHMT2-206ENST00000553529 NRG3P56975 720 aa16.64■□□□□ 0.25
SHMT2-206ENST00000553529 CRYZQ08257 329 aaKnown RBP16.64■□□□□ 0.25
SHMT2-206ENST00000553529 TOMM20Q15388 145 aa16.64■□□□□ 0.25
SHMT2-206ENST00000553529 CEBPEQ15744 281 aa16.64■□□□□ 0.25
SHMT2-206ENST00000553529 ERCC6LQ2NKX8 1250 aa16.64■□□□□ 0.25
SHMT2-206ENST00000553529 C1orf185Q5T7R7 199 aa16.64■□□□□ 0.25
SHMT2-206ENST00000553529 TMEM198Q66K66 360 aa16.64■□□□□ 0.25
SHMT2-206ENST00000553529 ZNF551Q7Z340 670 aaPredicted RBP16.64■□□□□ 0.25
SHMT2-206ENST00000553529 WDSUB1Q8N9V3 476 aa16.64■□□□□ 0.25
SHMT2-206ENST00000553529 C7orf57Q8NEG2 295 aa16.64■□□□□ 0.25
SHMT2-206ENST00000553529 TCP10LQ8TDR4 215 aa16.64■□□□□ 0.25
SHMT2-206ENST00000553529 RND1Q92730 232 aa16.64■□□□□ 0.25
SHMT2-206ENST00000553529 CCDC126Q96EE4 140 aa16.64■□□□□ 0.25
SHMT2-206ENST00000553529 ADOQ96SZ5 270 aa16.64■□□□□ 0.25
SHMT2-206ENST00000553529 METTL7AQ9H8H3 244 aa16.64■□□□□ 0.25
SHMT2-206ENST00000553529 ZNF395Q9H8N7 513 aaPredicted RBP16.64■□□□□ 0.25
SHMT2-206ENST00000553529 FBXL2Q9UKC9 423 aa16.64■□□□□ 0.25
SHMT2-206ENST00000553529 STK38LQ9Y2H1 464 aa16.64■□□□□ 0.25
SHMT2-206ENST00000553529 NOTCH2Q04721 2471 aa16.63■□□□□ 0.25
SHMT2-206ENST00000553529 ANKRD33BA6NCL7 494 aa16.63■□□□□ 0.25
SHMT2-206ENST00000553529 OR14I1A6ND48 311 aa16.63■□□□□ 0.25
SHMT2-206ENST00000553529 FRG2CA6NGY1 282 aa16.63■□□□□ 0.25
SHMT2-206ENST00000553529 BCKDKO14874 412 aa16.63■□□□□ 0.25
SHMT2-206ENST00000553529 SEC22BO75396 215 aa16.63■□□□□ 0.25
SHMT2-206ENST00000553529 REM1O75628 298 aa16.63■□□□□ 0.25
SHMT2-206ENST00000553529 RSL1D1O76021 490 aaKnown RBP16.63■□□□□ 0.25
SHMT2-206ENST00000553529 UROSP10746 265 aa16.63■□□□□ 0.25
SHMT2-206ENST00000553529 CDK9P50750 372 aaKnown RBP16.63■□□□□ 0.25
SHMT2-206ENST00000553529 ZNF155Q12901 538 aaPredicted RBP16.63■□□□□ 0.25
SHMT2-206ENST00000553529 RFTN2Q52LD8 501 aaPredicted RBP16.63■□□□□ 0.25
SHMT2-206ENST00000553529 SH2D4BQ5SQS7 431 aa16.63■□□□□ 0.25
SHMT2-206ENST00000553529 KANK2Q63ZY3 851 aa16.63■□□□□ 0.25
SHMT2-206ENST00000553529 B3GNT6Q6ZMB0 384 aa16.63■□□□□ 0.25
SHMT2-206ENST00000553529 MEX3BQ6ZN04 569 aaKnown RBP16.63■□□□□ 0.25
SHMT2-206ENST00000553529 GALNT10Q86SR1 603 aa16.63■□□□□ 0.25
SHMT2-206ENST00000553529 SLC44A2Q8IWA5 706 aaPredicted RBP16.63■□□□□ 0.25
SHMT2-206ENST00000553529 ULK2Q8IYT8 1036 aa16.63■□□□□ 0.25
SHMT2-206ENST00000553529 FAM9CQ8IZT9 166 aa16.63■□□□□ 0.25
SHMT2-206ENST00000553529 C17orf47Q8NEP4 570 aa16.63■□□□□ 0.25
SHMT2-206ENST00000553529 OTUB1Q96FW1 271 aaPredicted RBP16.63■□□□□ 0.25
SHMT2-206ENST00000553529 PKNOX2Q96KN3 472 aa16.63■□□□□ 0.25
SHMT2-206ENST00000553529 TSSK3Q96PN8 268 aa16.63■□□□□ 0.25
SHMT2-206ENST00000553529 BBS4Q96RK4 519 aa16.63■□□□□ 0.25
SHMT2-206ENST00000553529 OSBPL11Q9BXB4 747 aa16.63■□□□□ 0.25
SHMT2-206ENST00000553529 MYNNQ9NPC7 610 aa16.63■□□□□ 0.25
SHMT2-206ENST00000553529 CHST11Q9NPF2 352 aa16.63■□□□□ 0.25
SHMT2-206ENST00000553529 SIRT5Q9NXA8 310 aa16.63■□□□□ 0.25
SHMT2-206ENST00000553529 COQ3Q9NZJ6 369 aa16.63■□□□□ 0.25
SHMT2-206ENST00000553529 LGALS13Q9UHV8 139 aa16.63■□□□□ 0.25
SHMT2-206ENST00000553529 PSME2Q9UL46 239 aa16.63■□□□□ 0.25
SHMT2-206ENST00000553529 DNAJC15Q9Y5T4 150 aa16.63■□□□□ 0.25
SHMT2-206ENST00000553529 ARHGAP21Q5T5U3 1957 aa16.63■□□□□ 0.25
SHMT2-206ENST00000553529 PRAMEF25A6NGN4 478 aa16.62■□□□□ 0.25
SHMT2-206ENST00000553529 AZIN1O14977 448 aa16.62■□□□□ 0.25
SHMT2-206ENST00000553529 TSPAN2O60636 221 aa16.62■□□□□ 0.25
SHMT2-206ENST00000553529 HCN1O60741 890 aa16.62■□□□□ 0.25
SHMT2-206ENST00000553529 ERN1O75460 977 aaKnown RBP16.62■□□□□ 0.25
SHMT2-206ENST00000553529 BMP7P18075 431 aa16.62■□□□□ 0.25
SHMT2-206ENST00000553529 SDC1P18827 310 aa16.62■□□□□ 0.25
SHMT2-206ENST00000553529 DRD5P21918 477 aa16.62■□□□□ 0.25
SHMT2-206ENST00000553529 PPICP45877 212 aa16.62■□□□□ 0.25
SHMT2-206ENST00000553529 AGFG1P52594 562 aaKnown RBP16.62■□□□□ 0.25
SHMT2-206ENST00000553529 RPL38P63173 70 aaKnown RBP16.62■□□□□ 0.25
SHMT2-206ENST00000553529 PSG6Q00889 435 aa16.62■□□□□ 0.25
SHMT2-206ENST00000553529 HEPACAMQ14CZ8 416 aa16.62■□□□□ 0.25
SHMT2-206ENST00000553529 UGT3A2Q3SY77 523 aa16.62■□□□□ 0.25
SHMT2-206ENST00000553529 GALNTL6Q49A17 601 aa16.62■□□□□ 0.25
SHMT2-206ENST00000553529 ARL13AQ5H913 290 aaPredicted RBP16.62■□□□□ 0.25
SHMT2-206ENST00000553529 WLSQ5T9L3 541 aa16.62■□□□□ 0.25
SHMT2-206ENST00000553529 DND1Q8IYX4 353 aaKnown RBP16.62■□□□□ 0.25
SHMT2-206ENST00000553529 LIX1Q8N485 282 aa16.62■□□□□ 0.25
SHMT2-206ENST00000553529 ACBD4Q8NC06 268 aa16.62■□□□□ 0.25
SHMT2-206ENST00000553529 FAM83FQ8NEG4 500 aaPredicted RBP16.62■□□□□ 0.25
SHMT2-206ENST00000553529 TNIP2Q8NFZ5 429 aa16.62■□□□□ 0.25
SHMT2-206ENST00000553529 LILRB4Q8NHJ6 448 aa16.62■□□□□ 0.25
SHMT2-206ENST00000553529 FBXO30Q8TB52 745 aa16.62■□□□□ 0.25
SHMT2-206ENST00000553529 SARAFQ96BY9 339 aa16.62■□□□□ 0.25
SHMT2-206ENST00000553529 TMEM41AQ96HV5 264 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms