RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 RIGQ13278 110 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 ZMYND11Q15326 602 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 UPP1Q16831 310 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 KNOP1Q1ED39 458 aaKnown RBP3.28□□□□□ -1.88
PCNX4-206ENST00000553513 CNPY1Q3B7I2 92 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 MS4A18Q3C1V0 323 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 LRIT3Q3SXY7 679 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 CCDC152Q4G0S7 254 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 FILIP1LQ4L180 1135 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 SLX4IPQ5VYV7 408 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 ASPHD2Q6ICH7 369 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 CENPPQ6IPU0 288 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 CBLN3Q6UW01 205 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 CES3Q6UWW8 571 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 C3P1Q6ZMU1 363 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 NET1Q7Z628 596 aaPredicted RBP3.28□□□□□ -1.88
PCNX4-206ENST00000553513 VASH2Q86V25 355 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 KCNMB4Q86W47 210 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 CATSPERDQ86XM0 798 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 BEST4Q8NFU0 473 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 TRMT10AQ8TBZ6 339 aaKnown RBP3.28□□□□□ -1.88
PCNX4-206ENST00000553513 LHX4Q969G2 390 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 CNRIP1Q96F85 164 aaPredicted RBP3.28□□□□□ -1.88
PCNX4-206ENST00000553513 SDSLQ96GA7 329 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 FAM218AQ96MZ4 157 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 ZNF300Q96RE9 604 aaPredicted RBP3.28□□□□□ -1.88
PCNX4-206ENST00000553513 CPXM1Q96SM3 734 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 CABLES2Q9BTV7 478 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 MRPL13Q9BYD1 178 aaKnown RBP3.28□□□□□ -1.88
PCNX4-206ENST00000553513 PUS3Q9BZE2 481 aaKnown RBP3.28□□□□□ -1.88
PCNX4-206ENST00000553513 UPF3AQ9H1J1 476 aaKnown RBP3.28□□□□□ -1.88
PCNX4-206ENST00000553513 RNF41Q9H4P4 317 aaPredicted RBP3.28□□□□□ -1.88
PCNX4-206ENST00000553513 DHX33Q9H6R0 707 aaKnown RBP3.28□□□□□ -1.88
PCNX4-206ENST00000553513 ALG9Q9H6U8 611 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 NT5DC2Q9H857 520 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 MOB1AQ9H8S9 216 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 NRN1Q9NPD7 142 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 DCAF13Q9NV06 445 aaKnown RBP3.28□□□□□ -1.88
PCNX4-206ENST00000553513 GPR83Q9NYM4 423 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 RNF14Q9UBS8 474 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 NIP7Q9Y221 180 aaKnown RBP eCLIP3.28□□□□□ -1.88
PCNX4-206ENST00000553513 MRPS18CQ9Y3D5 142 aaKnown RBP3.28□□□□□ -1.88
PCNX4-206ENST00000553513 AP4B1Q9Y6B7 739 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 CUX2O14529 1486 aa3.28□□□□□ -1.88
PCNX4-206ENST00000553513 KIAA1210Q9ULL0 1709 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 CARMIL1Q5VZK9 1371 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 IGLV7-46A0A075B6I9 117 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 BCLAF3A2AJT9 711 aaKnown RBP3.27□□□□□ -1.89
PCNX4-206ENST00000553513 GLTPD2A6NH11 291 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 NPIPA2E9PIF3 369 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 TPST2O60704 377 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 SDC3O75056 442 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 PALMO75781 387 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 PDE5AO76074 875 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 ECDO95905 644 aaPredicted RBP3.27□□□□□ -1.89
PCNX4-206ENST00000553513 GOT2P00505 430 aaKnown RBP3.27□□□□□ -1.89
PCNX4-206ENST00000553513 HPRP00739 348 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 FCGR3AP08637 254 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 DRD5P21918 477 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 OXTRP30559 389 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 EMDP50402 254 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 SRPXP78539 464 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 CBX1P83916 185 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 LRRC74AQ0VAA2 488 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 FUT7Q11130 342 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 IL24Q13007 206 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 GPM6BQ13491 265 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 FASTKD3Q14CZ7 662 aaKnown RBP3.27□□□□□ -1.89
PCNX4-206ENST00000553513 ZSWIM7Q19AV6 140 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 MAJINQ3KP22 176 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 UNC50Q53HI1 259 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 ADAMTSL4-AS1Q5T5F5 129 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 ARHGAP11AQ6P4F7 1023 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 TRIM65Q6PJ69 517 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 MOB2Q70IA6 237 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 ERICH1Q86X53 443 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 CATSPER3Q86XQ3 398 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 CHDHQ8NE62 594 aaPredicted RBP3.27□□□□□ -1.89
PCNX4-206ENST00000553513 OR52M1Q8NGK5 317 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 TMEM190Q8WZ59 177 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 UPRTQ96BW1 309 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 ATXN7L3BQ96GX2 97 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 RCHY1Q96PM5 261 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 OVOL2Q9BRP0 275 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 Q9HAA7 133 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 FAM114A2Q9NRY5 505 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 DEPPQ9NTK1 212 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 NDE1Q9NXR1 346 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 THYN1Q9P016 225 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 PURGQ9UJV8 347 aaKnown RBP3.27□□□□□ -1.89
PCNX4-206ENST00000553513 EMCNQ9ULC0 261 aa3.27□□□□□ -1.89
PCNX4-206ENST00000553513 EXOGQ9Y2C4 368 aaKnown RBP3.27□□□□□ -1.89
PCNX4-206ENST00000553513 CCDC7Q96M83 1385 aa3.26□□□□□ -1.89
PCNX4-206ENST00000553513 PPIAL4CA0A0B4J2A2 164 aa3.26□□□□□ -1.89
PCNX4-206ENST00000553513 TRGV8A0A0C4DH27 118 aa3.26□□□□□ -1.89
PCNX4-206ENST00000553513 LRRC30A6NM36 301 aa3.26□□□□□ -1.89
PCNX4-206ENST00000553513 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.26□□□□□ -1.89
PCNX4-206ENST00000553513 C11orf98E9PRG8 122 aa3.26□□□□□ -1.89
PCNX4-206ENST00000553513 PPIAL4DF5H284 164 aa3.26□□□□□ -1.89
PCNX4-206ENST00000553513 H0YL77 283 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms