RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 TSSK3Q96PN8 268 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 PRPF18Q99633 342 aaKnown RBP14.09□□□□□ -0.15
SHMT2-204ENST00000553324 PAIP2Q9BPZ3 127 aaKnown RBP14.09□□□□□ -0.15
SHMT2-204ENST00000553324 ANGPTL4Q9BY76 406 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 LDAHQ9H6V9 325 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 PROK2Q9HC23 129 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 ACSS1Q9NUB1 689 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-204ENST00000553324 DDX18Q9NVP1 670 aaKnown RBP14.09□□□□□ -0.15
SHMT2-204ENST00000553324 BAIAP2L1Q9UHR4 511 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 C19orf53Q9UNZ5 99 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-204ENST00000553324 EIF3LQ9Y262 564 aaKnown RBP14.09□□□□□ -0.15
SHMT2-204ENST00000553324 DTX4Q9Y2E6 619 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 HIVEP3Q5T1R4 2406 aa14.09□□□□□ -0.15
SHMT2-204ENST00000553324 A0A1B0GVC2 190 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 OR6C70A6NIJ9 312 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 E9PLN8 166 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 BCKDKO14874 412 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 ZG16O60844 167 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 TRIM3O75382 744 aaPredicted RBP14.08□□□□□ -0.16
SHMT2-204ENST00000553324 ERN1O75460 977 aaKnown RBP14.08□□□□□ -0.16
SHMT2-204ENST00000553324 CT45A8P0DMV1 189 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 CT45A9P0DMV2 189 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 ARRB2P32121 409 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 HPCAL1P37235 193 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 CASP3P42574 277 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 MAGEA5P43359 124 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 SMSP52788 366 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 MANFP55145 182 aaKnown RBP14.08□□□□□ -0.16
SHMT2-204ENST00000553324 HSF1Q00613 529 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 PDE7AQ13946 482 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 EFR3AQ14156 821 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 MPP2Q14168 576 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 ZNHIT3Q15649 155 aaPredicted RBP14.08□□□□□ -0.16
SHMT2-204ENST00000553324 CT45A2Q5DJT8 189 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 C6orf136Q5SQH8 315 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 SLC30A6Q6NXT4 461 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 XKRXQ6PP77 449 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 CHERPQ8IWX8 916 aaKnown RBP14.08□□□□□ -0.16
SHMT2-204ENST00000553324 PRR22Q8IZ63 422 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 OR2L13Q8N349 312 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 SIMC1Q8NDZ2 872 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 CEP70Q8NHQ1 597 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 GFM2Q969S9 779 aaKnown RBP14.08□□□□□ -0.16
SHMT2-204ENST00000553324 DTNBP1Q96EV8 351 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 ZNF597Q96LX8 424 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 JSRP1Q96MG2 331 aaPredicted RBP14.08□□□□□ -0.16
SHMT2-204ENST00000553324 COL21A1Q96P44 957 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 VKORC1Q9BQB6 163 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 METTL7AQ9H8H3 244 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 FOLH1BQ9HBA9 442 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 TMBIM4Q9HC24 238 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 ACKR4Q9NPB9 350 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 ATAD3AQ9NVI7 634 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 NKIRAS1Q9NYS0 192 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 SH3BGRL2Q9UJC5 107 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 TINAGQ9UJW2 476 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 MRTO4Q9UKD2 239 aaKnown RBP14.08□□□□□ -0.16
SHMT2-204ENST00000553324 MAPRE3Q9UPY8 281 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 MEMO1Q9Y316 297 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 DOPEY2Q9Y3R5 2298 aa14.08□□□□□ -0.16
SHMT2-204ENST00000553324 ATP6AP2A0A1C7CYW4 349 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 TMEM120BA0PK00 339 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 UPK1AO00322 258 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 AQP7O14520 342 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 AKAP10O43572 662 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 ITM2AO43736 263 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 SKAP2O75563 359 aaPredicted RBP14.07□□□□□ -0.16
SHMT2-204ENST00000553324 REM1O75628 298 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 ATP6AP2O75787 350 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 LRATO95237 230 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 TPOP07202 933 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 RNF224P0DH78 156 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 AGAP20933 346 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 ELAVL4P26378 380 aaKnown RBP14.07□□□□□ -0.16
SHMT2-204ENST00000553324 GPC1P35052 558 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 MC3RP41968 323 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 MASP1P48740 699 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 PNLIPRP2P54317 469 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 MAGOHP61326 146 aaKnown RBP14.07□□□□□ -0.16
SHMT2-204ENST00000553324 EMX2Q04743 252 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 CASP8Q14790 479 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 MLC1Q15049 377 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 NNATQ16517 81 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 PRSS53Q2L4Q9 553 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 CYP27C1Q4G0S4 372 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 TMEM211Q6ICI0 200 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 TMEM107Q6UX40 140 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 TRILQ7L0X0 811 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 TRIM42Q8IWZ5 723 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 ZNF781Q8N8C0 355 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 PHF10Q8WUB8 498 aaKnown RBP14.07□□□□□ -0.16
SHMT2-204ENST00000553324 TMBIM1Q969X1 311 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 CCDC120Q96HB5 630 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 TMEM41AQ96HV5 264 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 C3orf30Q96M34 536 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 RILPQ96NA2 401 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 C3orf14Q9HBI5 128 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 ATP6V1HQ9UI12 483 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 HAO1Q9UJM8 370 aa14.07□□□□□ -0.16
SHMT2-204ENST00000553324 OR10H1Q9Y4A9 318 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms