RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 ACP2P11117 423 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 POU3F3P20264 500 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 SDHBP21912 280 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 BSGP35613 385 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 OR3A3P47888 321 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 EVX1P49640 407 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 MAPK12P53778 367 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 CLDN20P56880 219 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 PPP3R1P63098 170 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 SLC7A9P82251 487 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 MLLT1Q03111 559 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 KLHL22Q53GT1 634 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 TYW3Q6IPR3 259 aaKnown RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 C1orf94Q6P1W5 598 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 METAP1DQ6UB28 335 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 CD300LDQ6UXZ3 194 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 LIPIQ6XZB0 460 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 IKBIPQ70UQ0 350 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 ZNF547Q8IVP9 402 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 FBXO15Q8NCQ5 510 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 C19orf18Q8NEA5 215 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 ANGPTL6Q8NI99 470 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 TMEM163Q8TC26 289 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 XAGE5Q8WWM1 108 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 OR5P2Q8WZ92 322 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 SMPDL3AQ92484 453 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 EXOSC8Q96B26 276 aaKnown RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 MED30Q96HR3 178 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 QRFPRQ96P65 431 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 KCNJ15Q99712 375 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 ARHGAP9Q9BRR9 750 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 MARVELD1Q9BSK0 173 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 TMEM43Q9BTV4 400 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 TMED9Q9BVK6 235 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 C11orf49Q9H6J7 331 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 NIPAL2Q9H841 368 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 FGF20Q9NP95 211 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 ISYNA1Q9NPH2 558 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 MRPS18AQ9NVS2 196 aaKnown RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 CUEDC1Q9NWM3 386 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 TEX10Q9NXF1 929 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 SLC23A1Q9UHI7 598 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 SLC25A13Q9UJS0 675 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 PRKAB1Q9Y478 270 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 PCDHGB7Q9Y5F8 929 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 UNC80Q8N2C7 3258 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 SNRNP200O75643 2136 aaKnown RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 DOCK9Q9BZ29 2069 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 A0A087WUU8 490 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 FAM240BA0A1B0GVZ2 78 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 FEZF1A0PJY2 475 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 CD8B2A6NJW9 211 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 ISM1B1AKI9 464 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 SLC30A4O14863 429 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 CASKO14936 926 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 TEX28O15482 410 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 PDPK1O15530 556 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 SPINT1O43278 529 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 MMP20O60882 483 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 PRKRAO75569 313 aaKnown RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 OR2B3O76000 313 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 CRYZL1O95825 349 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 CH25HO95992 272 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 PAHP00439 452 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 CHRM4P08173 479 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 ALPPL2P10696 532 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 CD8BP10966 210 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 ACADMP11310 421 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 IFI30P13284 250 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 ARSBP15848 533 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 MYL12AP19105 171 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 PTBP1P26599 531 aaKnown RBP eCLIP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 FGF9P31371 208 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 GABRA5P31644 462 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 CCR2P41597 374 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 FUT5Q11128 374 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 IL18Q14116 193 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 WSCD2Q2TBF2 565 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 ZNF284Q2VY69 593 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 ZNF791Q3KP31 576 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 ENTPD8Q5MY95 495 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 CLEC12AQ5QGZ9 265 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 TRIQKQ629K1 86 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 KIAA1211LQ6NV74 962 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 MZT2BQ6NZ67 158 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 FAM83HQ6ZRV2 1179 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 PRICKLE2Q7Z3G6 844 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 DEFB128Q7Z7B8 93 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 SLC38A6Q8IZM9 456 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 FAM160A2Q8N612 972 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 PLA2G15Q8NCC3 412 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 SNIP1Q8TAD8 396 aaKnown RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 TTC9Q92623 222 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 MRPS31Q92665 395 aaKnown RBP5.1□□□□□ -1.59
LIMA1-212ENST00000552491 KLK6Q92876 244 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 UFD1Q92890 307 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 ZG16BQ96DA0 208 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 MRGPRX3Q96LB0 322 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 YIPF4Q9BSR8 244 aa5.1□□□□□ -1.59
LIMA1-212ENST00000552491 WACQ9BTA9 647 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms