RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 ONECUT2O95948 504 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 C1QCP02747 245 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 CDH2P19022 906 aaPredicted RBP11.75□□□□□ -0.53
CACNB3-217ENST00000550483 ALAS2P22557 587 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 CSTF2P33240 577 aaKnown RBP eCLIP11.75□□□□□ -0.53
CACNB3-217ENST00000550483 KCNJ5P48544 419 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 SNRPNP63162 240 aaKnown RBP11.75□□□□□ -0.53
CACNB3-217ENST00000550483 DAG1Q14118 895 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 LTB4RQ15722 352 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 ARHGAP11BQ3KRB8 267 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 GPAT3Q53EU6 434 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 AP1ARQ63HQ0 302 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 ZNF574Q6ZN55 896 aaPredicted RBP11.75□□□□□ -0.53
CACNB3-217ENST00000550483 EPHX4Q8IUS5 362 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 SLITRK4Q8IW52 837 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 OR4N5Q8IXE1 308 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 MARVELD2Q8N4S9 558 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 TMEM52Q8NDY8 209 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 RAB8BQ92930 207 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 TMBIM1Q969X1 311 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 MAGED4Q96JG8 741 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 C7orf34Q96L11 122 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 ZNF354BQ96LW1 612 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 CCDC74BQ96LY2 380 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 PINK1Q9BXM7 581 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 ALOXE3Q9BYJ1 711 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 TGIF2Q9GZN2 237 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 NTN4Q9HB63 628 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 SMPD3Q9NY59 655 aaPredicted RBP11.75□□□□□ -0.53
CACNB3-217ENST00000550483 NDOR1Q9UHB4 597 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 SLC13A4Q9UKG4 626 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 PCDHGA8Q9Y5G5 932 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 ORC6Q9Y5N6 252 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 DSPPQ9NZW4 1301 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 DMXL2Q8TDJ6 3036 aa11.75□□□□□ -0.53
CACNB3-217ENST00000550483 GCN1Q92616 2671 aaKnown RBP11.74□□□□□ -0.53
CACNB3-217ENST00000550483 FAM227AF5H4B4 570 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 H0YAE9 185 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 LRP3O75074 770 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 DNAJB6O75190 326 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 MED26O95402 600 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 ALPPP05187 535 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 CTSBP07858 339 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 ZNF806P0C7X5 589 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 MYF5P13349 255 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 RHCEP18577 417 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 PRKAR1BP31321 381 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 IFNA8P32881 189 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 RORAP35398 523 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 RPS6KA3P51812 740 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 CRYBA2P53672 197 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 RAD23AP54725 363 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 CASP9P55211 416 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 MGAT2Q10469 447 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 EIPR1Q53HC9 387 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 ARHGAP40Q5TG30 622 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 FAM111BQ6SJ93 734 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 VTCN1Q7Z7D3 282 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 PPP1R3BQ86XI6 285 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 PEX5LQ8IYB4 626 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 GALNT4Q8N4A0 578 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 AGBL5Q8NDL9 886 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 OR5D16Q8NGK9 328 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 ZNF570Q96NI8 536 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 COL21A1Q96P44 957 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 ZNF300Q96RE9 604 aaPredicted RBP11.74□□□□□ -0.53
CACNB3-217ENST00000550483 PIP5K1AQ99755 562 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 LMF2Q9BU23 707 aaKnown RBP11.74□□□□□ -0.53
CACNB3-217ENST00000550483 TMEM121BQ9BXQ6 578 aaPredicted RBP11.74□□□□□ -0.53
CACNB3-217ENST00000550483 ARMC7Q9H6L4 198 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 SYNDIG1Q9H7V2 258 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 MTHFD2LQ9H903 347 aaPredicted RBP11.74□□□□□ -0.53
CACNB3-217ENST00000550483 SIDT1Q9NXL6 827 aaKnown RBP11.74□□□□□ -0.53
CACNB3-217ENST00000550483 KLHL28Q9NXS3 571 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 ENOPH1Q9UHY7 261 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 C3orf18Q9UK00 162 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 ATXN7L1Q9ULK2 861 aaPredicted RBP11.74□□□□□ -0.53
CACNB3-217ENST00000550483 AP4B1Q9Y6B7 739 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 ENPP4Q9Y6X5 453 aa11.74□□□□□ -0.53
CACNB3-217ENST00000550483 IGLV3-12A0A075B6K2 115 aa11.73□□□□□ -0.53
CACNB3-217ENST00000550483 IGKV3D-11A0A0A0MRZ8 115 aa11.73□□□□□ -0.53
CACNB3-217ENST00000550483 ARRDC5A6NEK1 342 aa11.73□□□□□ -0.53
CACNB3-217ENST00000550483 SOCS2O14508 198 aa11.73□□□□□ -0.53
CACNB3-217ENST00000550483 EI24O14681 340 aa11.73□□□□□ -0.53
CACNB3-217ENST00000550483 SLC30A4O14863 429 aa11.73□□□□□ -0.53
CACNB3-217ENST00000550483 STX11O75558 287 aa11.73□□□□□ -0.53
CACNB3-217ENST00000550483 NKX2-2O95096 273 aa11.73□□□□□ -0.53
CACNB3-217ENST00000550483 FESP07332 822 aa11.73□□□□□ -0.53
CACNB3-217ENST00000550483 THBS1P07996 1170 aa11.73□□□□□ -0.53
CACNB3-217ENST00000550483 CDK4P11802 303 aa11.73□□□□□ -0.53
CACNB3-217ENST00000550483 FGF5P12034 268 aa11.73□□□□□ -0.53
CACNB3-217ENST00000550483 CD247P20963 164 aa11.73□□□□□ -0.53
CACNB3-217ENST00000550483 CCKBRP32239 447 aa11.73□□□□□ -0.53
CACNB3-217ENST00000550483 DCTP40126 519 aa11.73□□□□□ -0.53
CACNB3-217ENST00000550483 MAP3K8P41279 467 aa11.73□□□□□ -0.53
CACNB3-217ENST00000550483 PSMD4P55036 377 aaKnown RBP11.73□□□□□ -0.53
CACNB3-217ENST00000550483 MRPS35P82673 323 aaKnown RBP11.73□□□□□ -0.53
CACNB3-217ENST00000550483 VLDLRP98155 873 aa11.73□□□□□ -0.53
CACNB3-217ENST00000550483 MAT1AQ00266 395 aaKnown RBP11.73□□□□□ -0.53
CACNB3-217ENST00000550483 E2F1Q01094 437 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms