RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 EXOSC7Q15024 291 aaKnown RBP21■□□□□ 0.95
SMARCD1-209ENST00000550477 TRADDQ15628 312 aa21■□□□□ 0.95
SMARCD1-209ENST00000550477 DCST1Q5T197 706 aa21■□□□□ 0.95
SMARCD1-209ENST00000550477 BIVMQ86UB2 503 aa21■□□□□ 0.95
SMARCD1-209ENST00000550477 TRIM42Q8IWZ5 723 aa21■□□□□ 0.95
SMARCD1-209ENST00000550477 PLD6Q8N2A8 252 aaKnown RBP21■□□□□ 0.95
SMARCD1-209ENST00000550477 GBP7Q8N8V2 638 aaPredicted RBP21■□□□□ 0.95
SMARCD1-209ENST00000550477 OR52R1Q8NGF1 315 aa21■□□□□ 0.95
SMARCD1-209ENST00000550477 COL21A1Q96P44 957 aa21■□□□□ 0.95
SMARCD1-209ENST00000550477 MRPL57Q9BQC6 102 aaKnown RBP21■□□□□ 0.95
SMARCD1-209ENST00000550477 TUBA1CQ9BQE3 449 aa21■□□□□ 0.95
SMARCD1-209ENST00000550477 OR2B2Q9GZK3 357 aa21■□□□□ 0.95
SMARCD1-209ENST00000550477 GALNT9Q9HCQ5 603 aa21■□□□□ 0.95
SMARCD1-209ENST00000550477 SERHLQ9NQF3 203 aa21■□□□□ 0.95
SMARCD1-209ENST00000550477 TAS2R10Q9NYW0 307 aa21■□□□□ 0.95
SMARCD1-209ENST00000550477 XPR1Q9UBH6 696 aa21■□□□□ 0.95
SMARCD1-209ENST00000550477 ZNF639Q9UID6 485 aa21■□□□□ 0.95
SMARCD1-209ENST00000550477 PLLPQ9Y342 182 aa21■□□□□ 0.95
SMARCD1-209ENST00000550477 ACANP16112 2415 aa21■□□□□ 0.95
SMARCD1-209ENST00000550477 C2orf72A6NCS6 295 aa20.99■□□□□ 0.95
SMARCD1-209ENST00000550477 FRG2CA6NGY1 282 aa20.99■□□□□ 0.95
SMARCD1-209ENST00000550477 OR6C70A6NIJ9 312 aa20.99■□□□□ 0.95
SMARCD1-209ENST00000550477 HOXB4P17483 251 aaPredicted RBP20.99■□□□□ 0.95
SMARCD1-209ENST00000550477 CKAP4Q07065 602 aaKnown RBP20.99■□□□□ 0.95
SMARCD1-209ENST00000550477 EFR3AQ14156 821 aa20.99■□□□□ 0.95
SMARCD1-209ENST00000550477 C8orf74Q6P047 294 aa20.99■□□□□ 0.95
SMARCD1-209ENST00000550477 LUZP2Q86TE4 346 aa20.99■□□□□ 0.95
SMARCD1-209ENST00000550477 PLCZ1Q86YW0 608 aa20.99■□□□□ 0.95
SMARCD1-209ENST00000550477 RDH11Q8TC12 318 aa20.99■□□□□ 0.95
SMARCD1-209ENST00000550477 INTS12Q96CB8 462 aaKnown RBP20.99■□□□□ 0.95
SMARCD1-209ENST00000550477 TM4SF18Q96CE8 201 aa20.99■□□□□ 0.95
SMARCD1-209ENST00000550477 CTHRC1Q96CG8 243 aa20.99■□□□□ 0.95
SMARCD1-209ENST00000550477 ERP27Q96DN0 273 aa20.99■□□□□ 0.95
SMARCD1-209ENST00000550477 UCN2Q96RP3 112 aa20.99■□□□□ 0.95
SMARCD1-209ENST00000550477 PLEKHF2Q9H8W4 249 aa20.99■□□□□ 0.95
SMARCD1-209ENST00000550477 ZBTB26Q9HCK0 441 aa20.99■□□□□ 0.95
SMARCD1-209ENST00000550477 GIMAP4Q9NUV9 329 aa20.99■□□□□ 0.95
SMARCD1-209ENST00000550477 BEX4Q9NWD9 120 aaPredicted RBP20.99■□□□□ 0.95
SMARCD1-209ENST00000550477 UTS2RQ9UKP6 389 aa20.99■□□□□ 0.95
SMARCD1-209ENST00000550477 SH3D21A4FU49 640 aa20.98■□□□□ 0.95
SMARCD1-209ENST00000550477 TO15178 435 aa20.98■□□□□ 0.95
SMARCD1-209ENST00000550477 UGT2B11O75310 529 aa20.98■□□□□ 0.95
SMARCD1-209ENST00000550477 PDYNP01213 254 aa20.98■□□□□ 0.95
SMARCD1-209ENST00000550477 CNTFP26441 200 aa20.98■□□□□ 0.95
SMARCD1-209ENST00000550477 SRD5A2P31213 254 aa20.98■□□□□ 0.95
SMARCD1-209ENST00000550477 MRPS22P82650 360 aaKnown RBP20.98■□□□□ 0.95
SMARCD1-209ENST00000550477 MGAT2Q10469 447 aa20.98■□□□□ 0.95
SMARCD1-209ENST00000550477 ERCC6LQ2NKX8 1250 aa20.98■□□□□ 0.95
SMARCD1-209ENST00000550477 TRMT12Q53H54 448 aaKnown RBP20.98■□□□□ 0.95
SMARCD1-209ENST00000550477 P4HA3Q7Z4N8 544 aa20.98■□□□□ 0.95
SMARCD1-209ENST00000550477 GRAMD2AQ8IUY3 354 aa20.98■□□□□ 0.95
SMARCD1-209ENST00000550477 NSUN5Q96P11 429 aaKnown RBP20.98■□□□□ 0.95
SMARCD1-209ENST00000550477 MRPL46Q9H2W6 279 aaKnown RBP20.98■□□□□ 0.95
SMARCD1-209ENST00000550477 DLL4Q9NR61 685 aa20.98■□□□□ 0.95
SMARCD1-209ENST00000550477 GALNT8Q9NY28 637 aa20.98■□□□□ 0.95
SMARCD1-209ENST00000550477 VPS29Q9UBQ0 182 aa20.98■□□□□ 0.95
SMARCD1-209ENST00000550477 DKKL1Q9UK85 242 aa20.98■□□□□ 0.95
SMARCD1-209ENST00000550477 MRPS18CQ9Y3D5 142 aaKnown RBP20.98■□□□□ 0.95
SMARCD1-209ENST00000550477 ARHGEF9O43307 516 aa20.97■□□□□ 0.95
SMARCD1-209ENST00000550477 KRT6AP02538 564 aa20.97■□□□□ 0.95
SMARCD1-209ENST00000550477 KRT6BP04259 564 aa20.97■□□□□ 0.95
SMARCD1-209ENST00000550477 HSD3B1P14060 373 aa20.97■□□□□ 0.95
SMARCD1-209ENST00000550477 HSD3B2P26439 372 aa20.97■□□□□ 0.95
SMARCD1-209ENST00000550477 IL12BP29460 328 aa20.97■□□□□ 0.95
SMARCD1-209ENST00000550477 ADSLP30566 484 aaPredicted RBP20.97■□□□□ 0.95
SMARCD1-209ENST00000550477 PTGDSP41222 190 aa20.97■□□□□ 0.95
SMARCD1-209ENST00000550477 KRT6CP48668 564 aa20.97■□□□□ 0.95
SMARCD1-209ENST00000550477 HMGCS1Q01581 520 aa20.97■□□□□ 0.95
SMARCD1-209ENST00000550477 SHEQ5VZ18 495 aa20.97■□□□□ 0.95
SMARCD1-209ENST00000550477 WDSUB1Q8N9V3 476 aa20.97■□□□□ 0.95
SMARCD1-209ENST00000550477 SLC44A1Q8WWI5 657 aa20.97■□□□□ 0.95
SMARCD1-209ENST00000550477 SMPDL3BQ92485 455 aa20.97■□□□□ 0.95
SMARCD1-209ENST00000550477 TMBIM1Q969X1 311 aa20.97■□□□□ 0.95
SMARCD1-209ENST00000550477 SFXN2Q96NB2 322 aa20.97■□□□□ 0.95
SMARCD1-209ENST00000550477 GSX1Q9H4S2 264 aaPredicted RBP20.97■□□□□ 0.95
SMARCD1-209ENST00000550477 EHD3Q9NZN3 535 aa20.97■□□□□ 0.95
SMARCD1-209ENST00000550477 RPH3AQ9Y2J0 694 aaPredicted RBP20.97■□□□□ 0.95
SMARCD1-209ENST00000550477 MED12Q93074 2177 aa20.96■□□□□ 0.95
SMARCD1-209ENST00000550477 KIAA1549Q9HCM3 1950 aa20.96■□□□□ 0.95
SMARCD1-209ENST00000550477 ESYT3A0FGR9 886 aa20.96■□□□□ 0.95
SMARCD1-209ENST00000550477 CBX7O95931 251 aa20.96■□□□□ 0.95
SMARCD1-209ENST00000550477 SLCO1A2P46721 670 aa20.96■□□□□ 0.95
SMARCD1-209ENST00000550477 EMDP50402 254 aa20.96■□□□□ 0.95
SMARCD1-209ENST00000550477 ETF1P62495 437 aaKnown RBP20.96■□□□□ 0.95
SMARCD1-209ENST00000550477 SLC7A5Q01650 507 aa20.96■□□□□ 0.95
SMARCD1-209ENST00000550477 GALNT1Q10472 559 aaPredicted RBP20.96■□□□□ 0.95
SMARCD1-209ENST00000550477 FOXF2Q12947 444 aa20.96■□□□□ 0.95
SMARCD1-209ENST00000550477 OR2A2Q6IF42 318 aa20.96■□□□□ 0.95
SMARCD1-209ENST00000550477 ADGRE4PQ86SQ3 457 aa20.96■□□□□ 0.95
SMARCD1-209ENST00000550477 C1orf52Q8N6N3 182 aaKnown RBP20.96■□□□□ 0.95
SMARCD1-209ENST00000550477 ZNF675Q8TD23 568 aa20.96■□□□□ 0.95
SMARCD1-209ENST00000550477 CNRIP1Q96F85 164 aaPredicted RBP20.96■□□□□ 0.95
SMARCD1-209ENST00000550477 C18orf12Q96KH6 178 aa20.96■□□□□ 0.95
SMARCD1-209ENST00000550477 FARSBQ9NSD9 589 aaKnown RBP20.96■□□□□ 0.95
SMARCD1-209ENST00000550477 NINJ2Q9NZG7 142 aa20.96■□□□□ 0.95
SMARCD1-209ENST00000550477 SENP1Q9P0U3 644 aa20.96■□□□□ 0.95
SMARCD1-209ENST00000550477 TRPS1Q9UHF7 1281 aa20.96■□□□□ 0.95
SMARCD1-209ENST00000550477 PACSIN3Q9UKS6 424 aa20.96■□□□□ 0.95
SMARCD1-209ENST00000550477 DLGAP4Q9Y2H0 992 aa20.96■□□□□ 0.95
SMARCD1-209ENST00000550477 GPR55Q9Y2T6 319 aaPredicted RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms