RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 FAM173AQ9BQD7 235 aa12.37□□□□□ -0.43
NUP188-211ENST00000550219 UCK2Q9BZX2 261 aa12.37□□□□□ -0.43
NUP188-211ENST00000550219 BRINP2Q9C0B6 783 aa12.37□□□□□ -0.43
NUP188-211ENST00000550219 RABEP2Q9H5N1 569 aa12.37□□□□□ -0.43
NUP188-211ENST00000550219 EXO5Q9H790 373 aa12.37□□□□□ -0.43
NUP188-211ENST00000550219 LYARQ9NX58 379 aaKnown RBP12.37□□□□□ -0.43
NUP188-211ENST00000550219 EIF3LQ9Y262 564 aaKnown RBP12.37□□□□□ -0.43
NUP188-211ENST00000550219 POLR3HQ9Y535 204 aaPredicted RBP12.37□□□□□ -0.43
NUP188-211ENST00000550219 GPR45Q9Y5Y3 372 aa12.37□□□□□ -0.43
NUP188-211ENST00000550219 ANKRD28O15084 1053 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 UBDO15205 165 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 DYRK3O43781 588 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 GBAP04062 536 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 CELA3AP09093 270 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 FAM58BPP0C7Q3 252 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 G6PDP11413 515 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 CNR1P21554 472 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 TACR1P25103 407 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 PIGAP37287 484 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 STT3AP46977 705 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 ATP4BP51164 291 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 MAPK12P53778 367 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 HNRNPH2P55795 449 aaKnown RBP12.36□□□□□ -0.43
NUP188-211ENST00000550219 C21orf58P58505 322 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 FOLH1Q04609 750 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 PMPCAQ10713 525 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 SF3A3Q12874 501 aaKnown RBP eCLIP12.36□□□□□ -0.439e-7■■■■□ 24.7
NUP188-211ENST00000550219 GSTA3Q16772 222 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 EMC4Q5J8M3 183 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 NDUFAF5Q5TEU4 345 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 PRAMEF20Q5VT98 475 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 TMEM198Q66K66 360 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 C18orf63Q68DL7 685 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 CYP20A1Q6UW02 462 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 DGAT2L6Q6ZPD8 337 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 CDH24Q86UP0 819 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 C9orf40Q8IXQ3 194 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 FAM109AQ8N4B1 249 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 ANKS4BQ8N8V4 417 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 GOLM1Q8NBJ4 401 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 OR10Q1Q8NGQ4 319 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 OR8K3Q8NH51 312 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 SLC22A8Q8TCC7 542 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 C16orf78Q8WTQ4 265 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 RILPQ96NA2 401 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 C1orf50Q9BV19 199 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 EBPLQ9BY08 206 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 ENKD1Q9H0I2 346 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 ZNF385DQ9H6B1 395 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 LDAHQ9H6V9 325 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 RPF2Q9H7B2 306 aaKnown RBP12.36□□□□□ -0.43
NUP188-211ENST00000550219 ZDHHC11Q9H8X9 412 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 IL1RL2Q9HB29 575 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 NPDC1Q9NQX5 325 aaPredicted RBP12.36□□□□□ -0.43
NUP188-211ENST00000550219 AIG1Q9NVV5 245 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 TUBA8Q9NY65 449 aaPredicted RBP12.36□□□□□ -0.43
NUP188-211ENST00000550219 PHF11Q9UIL8 331 aa12.36□□□□□ -0.43
NUP188-211ENST00000550219 A0A1W2PR48 441 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 FIGNL2A6NMB9 653 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 E9PBE3 544 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 HRKO00198 91 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 PROM1O43490 865 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 OR10H2O60403 315 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 GLSO94925 669 aaPredicted RBP12.35□□□□□ -0.43
NUP188-211ENST00000550219 LRATO95237 230 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 IDO1P14902 403 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 BUD31P41223 144 aaPredicted RBP12.35□□□□□ -0.43
NUP188-211ENST00000550219 ASMTP46597 345 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 KCNJ2P63252 427 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 ZNF763Q0D2J5 394 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 GXYLT1Q4G148 440 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 GKAP1Q5VSY0 366 aaPredicted RBP12.35□□□□□ -0.43
NUP188-211ENST00000550219 FAM71E1Q6IPT2 247 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 IKBIPQ70UQ0 350 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 GPR180Q86V85 440 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 FAM9CQ8IZT9 166 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 LIX1Q8N485 282 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 FAM13CQ8NE31 585 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 BCAS4Q8TDM0 211 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 SENP5Q96HI0 755 aaPredicted RBP12.35□□□□□ -0.43
NUP188-211ENST00000550219 ART5Q96L15 291 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 MCCC2Q9HCC0 563 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 MYNNQ9NPC7 610 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 KCNJ16Q9NPI9 418 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 SDR39U1Q9NRG7 319 aaPredicted RBP12.35□□□□□ -0.43
NUP188-211ENST00000550219 MS4A12Q9NXJ0 267 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 BAIAP2L1Q9UHR4 511 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 TRIM33Q9UPN9 1127 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 EXO1Q9UQ84 846 aaKnown RBP12.35□□□□□ -0.43
NUP188-211ENST00000550219 ERVK-19Q9WJR5 959 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 ARL2BPQ9Y2Y0 163 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 ATG4BQ9Y4P1 393 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 CACNA1CQ13936 2221 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 APCP25054 2843 aa12.35□□□□□ -0.43
NUP188-211ENST00000550219 GNG14A0A1W2PPG7 69 aa12.34□□□□□ -0.43
NUP188-211ENST00000550219 GLOD5A6NK44 160 aa12.34□□□□□ -0.43
NUP188-211ENST00000550219 BCKDKO14874 412 aa12.34□□□□□ -0.43
NUP188-211ENST00000550219 GUCY1B2O75343 617 aa12.34□□□□□ -0.43
NUP188-211ENST00000550219 NR2F6P10588 404 aa12.34□□□□□ -0.43
NUP188-211ENST00000550219 ACVR2AP27037 513 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms