RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 FAR1Q8WVX9 515 aa17.84■□□□□ 0.45
DDX54-207ENST00000550016 TEX37Q96LM6 180 aa17.84■□□□□ 0.45
DDX54-207ENST00000550016 CCDC28BQ9BUN5 200 aa17.84■□□□□ 0.45
DDX54-207ENST00000550016 TCF7L2Q9NQB0 619 aa17.84■□□□□ 0.45
DDX54-207ENST00000550016 SIRT3Q9NTG7 399 aaPredicted RBP17.84■□□□□ 0.45
DDX54-207ENST00000550016 ASPDHA6ND91 283 aa17.83■□□□□ 0.44
DDX54-207ENST00000550016 E9PBE3 544 aa17.83■□□□□ 0.44
DDX54-207ENST00000550016 CFLARO15519 480 aa17.83■□□□□ 0.44
DDX54-207ENST00000550016 PEX1O43933 1283 aa17.83■□□□□ 0.44
DDX54-207ENST00000550016 C6orf47O95873 294 aa17.83■□□□□ 0.44
DDX54-207ENST00000550016 P04436 131 aa17.83■□□□□ 0.44
DDX54-207ENST00000550016 CNR1P21554 472 aa17.83■□□□□ 0.44
DDX54-207ENST00000550016 S100A3P33764 101 aa17.83■□□□□ 0.44
DDX54-207ENST00000550016 KIR3DL1P43629 444 aa17.83■□□□□ 0.44
DDX54-207ENST00000550016 PRKAG1P54619 331 aa17.83■□□□□ 0.44
DDX54-207ENST00000550016 WNT3P56703 355 aa17.83■□□□□ 0.44
DDX54-207ENST00000550016 CORO7P57737 925 aa17.83■□□□□ 0.44
DDX54-207ENST00000550016 PSPHP78330 225 aa17.83■□□□□ 0.44
DDX54-207ENST00000550016 ZNF155Q12901 538 aaPredicted RBP17.83■□□□□ 0.44
DDX54-207ENST00000550016 PDCD4Q53EL6 469 aaKnown RBP17.83■□□□□ 0.44
DDX54-207ENST00000550016 ANXA8L1Q5VT79 327 aa17.83■□□□□ 0.44
DDX54-207ENST00000550016 SLC44A2Q8IWA5 706 aaPredicted RBP17.83■□□□□ 0.44
DDX54-207ENST00000550016 PAQR8Q8TEZ7 354 aa17.83■□□□□ 0.44
DDX54-207ENST00000550016 MARK4Q96L34 752 aa17.83■□□□□ 0.44
DDX54-207ENST00000550016 ZBTB18Q99592 522 aa17.83■□□□□ 0.44
DDX54-207ENST00000550016 EBF4Q9BQW3 602 aa17.83■□□□□ 0.44
DDX54-207ENST00000550016 SH2D2AQ9NP31 389 aa17.83■□□□□ 0.44
DDX54-207ENST00000550016 SACM1LQ9NTJ5 587 aa17.83■□□□□ 0.44
DDX54-207ENST00000550016 CNIH4Q9P003 139 aa17.83■□□□□ 0.44
DDX54-207ENST00000550016 FREM3P0C091 2139 aa17.83■□□□□ 0.44
DDX54-207ENST00000550016 ESPL1Q14674 2120 aa17.83■□□□□ 0.44
DDX54-207ENST00000550016 PRSS51A0A1B0GVH4 220 aa17.82■□□□□ 0.44
DDX54-207ENST00000550016 TTC36A6NLP5 189 aa17.82■□□□□ 0.44
DDX54-207ENST00000550016 J3QKU1 62 aa17.82■□□□□ 0.44
DDX54-207ENST00000550016 RNASET2O00584 256 aaKnown RBP17.82■□□□□ 0.44
DDX54-207ENST00000550016 TP53I11O14683 189 aa17.82■□□□□ 0.44
DDX54-207ENST00000550016 PPM1BO75688 479 aa17.82■□□□□ 0.44
DDX54-207ENST00000550016 SLC22A3O75751 556 aa17.82■□□□□ 0.44
DDX54-207ENST00000550016 ABCB1P08183 1280 aaPredicted RBP17.82■□□□□ 0.44
DDX54-207ENST00000550016 CCL3P10147 92 aa17.82■□□□□ 0.44
DDX54-207ENST00000550016 MEOX1P50221 254 aa17.82■□□□□ 0.44
DDX54-207ENST00000550016 PHC1P78364 1004 aa17.82■□□□□ 0.44
DDX54-207ENST00000550016 PRR5P85299 388 aa17.82■□□□□ 0.44
DDX54-207ENST00000550016 PMP22Q01453 160 aa17.82■□□□□ 0.44
DDX54-207ENST00000550016 GUCY1A3Q02108 690 aa17.82■□□□□ 0.44
DDX54-207ENST00000550016 ZNHIT3Q15649 155 aaPredicted RBP17.82■□□□□ 0.44
DDX54-207ENST00000550016 FAM174BQ3ZCQ3 159 aa17.82■□□□□ 0.44
DDX54-207ENST00000550016 SPANXN4Q5MJ08 99 aa17.82■□□□□ 0.44
DDX54-207ENST00000550016 ZNF324BQ6AW86 544 aaPredicted RBP17.82■□□□□ 0.44
DDX54-207ENST00000550016 NPSR1Q6W5P4 371 aa17.82■□□□□ 0.44
DDX54-207ENST00000550016 SLC34A3Q8N130 599 aa17.82■□□□□ 0.44
DDX54-207ENST00000550016 POGLUT1Q8NBL1 392 aa17.82■□□□□ 0.44
DDX54-207ENST00000550016 GLB1L3Q8NCI6 653 aaPredicted RBP17.82■□□□□ 0.44
DDX54-207ENST00000550016 VPS37AQ8NEZ2 397 aa17.82■□□□□ 0.44
DDX54-207ENST00000550016 OR10G3Q8NGC4 313 aa17.82■□□□□ 0.44
DDX54-207ENST00000550016 OR5M3Q8NGP4 307 aa17.82■□□□□ 0.44
DDX54-207ENST00000550016 STON2Q8WXE9 905 aa17.82■□□□□ 0.44
DDX54-207ENST00000550016 OMA1Q96E52 524 aa17.82■□□□□ 0.44
DDX54-207ENST00000550016 CCDC134Q9H6E4 229 aa17.82■□□□□ 0.44
DDX54-207ENST00000550016 NEUROD4Q9HD90 331 aa17.82■□□□□ 0.44
DDX54-207ENST00000550016 SDR39U1Q9NRG7 319 aaPredicted RBP17.82■□□□□ 0.44
DDX54-207ENST00000550016 ZIM2Q9NZV7 527 aa17.82■□□□□ 0.44
DDX54-207ENST00000550016 PCDHGB4Q9UN71 923 aa17.82■□□□□ 0.44
DDX54-207ENST00000550016 SNX8Q9Y5X2 465 aa17.82■□□□□ 0.44
DDX54-207ENST00000550016 CHCHD2Q9Y6H1 151 aaPredicted RBP17.82■□□□□ 0.44
DDX54-207ENST00000550016 GTF3C1Q12789 2109 aa17.81■□□□□ 0.44
DDX54-207ENST00000550016 SCN2BO60939 215 aa17.81■□□□□ 0.44
DDX54-207ENST00000550016 IL12AP29459 219 aa17.81■□□□□ 0.44
DDX54-207ENST00000550016 MDH1P40925 334 aaKnown RBP17.81■□□□□ 0.44
DDX54-207ENST00000550016 CCT3P49368 545 aaKnown RBP17.81■□□□□ 0.44
DDX54-207ENST00000550016 FBXW4P57775 412 aa17.81■□□□□ 0.44
DDX54-207ENST00000550016 GPR85P60893 370 aa17.81■□□□□ 0.44
DDX54-207ENST00000550016 HBA1P69905 142 aa17.81■□□□□ 0.44
DDX54-207ENST00000550016 PSG6Q00889 435 aa17.81■□□□□ 0.44
DDX54-207ENST00000550016 PLCXD2Q0VAA5 305 aa17.81■□□□□ 0.44
DDX54-207ENST00000550016 NUP54Q7Z3B4 507 aa17.81■□□□□ 0.44
DDX54-207ENST00000550016 SZRD1Q7Z422 152 aa17.81■□□□□ 0.44
DDX54-207ENST00000550016 MIER2Q8N344 545 aa17.81■□□□□ 0.44
DDX54-207ENST00000550016 FBXW8Q8N3Y1 598 aa17.81■□□□□ 0.44
DDX54-207ENST00000550016 CPSF7Q8N684 471 aaKnown RBP17.81■□□□□ 0.44
DDX54-207ENST00000550016 GALNT11Q8NCW6 608 aa17.81■□□□□ 0.44
DDX54-207ENST00000550016 OR2M7Q8NG81 312 aa17.81■□□□□ 0.44
DDX54-207ENST00000550016 TMBIM1Q969X1 311 aa17.81■□□□□ 0.44
DDX54-207ENST00000550016 FAM120BQ96EK7 910 aaKnown RBP17.81■□□□□ 0.44
DDX54-207ENST00000550016 THOC1Q96FV9 657 aaKnown RBP17.81■□□□□ 0.44
DDX54-207ENST00000550016 FRMD6Q96NE9 622 aa17.81■□□□□ 0.44
DDX54-207ENST00000550016 MS4A4EQ96PG1 132 aa17.81■□□□□ 0.44
DDX54-207ENST00000550016 FAM173AQ9BQD7 235 aa17.81■□□□□ 0.44
DDX54-207ENST00000550016 SIKE1Q9BRV8 207 aa17.81■□□□□ 0.44
DDX54-207ENST00000550016 LMF2Q9BU23 707 aaKnown RBP17.81■□□□□ 0.44
DDX54-207ENST00000550016 CXorf36Q9H7Y0 433 aa17.81■□□□□ 0.44
DDX54-207ENST00000550016 NPHS2Q9NP85 383 aa17.81■□□□□ 0.44
DDX54-207ENST00000550016 EQTNQ9NQ60 294 aa17.81■□□□□ 0.44
DDX54-207ENST00000550016 DEPPQ9NTK1 212 aa17.81■□□□□ 0.44
DDX54-207ENST00000550016 ZCCHC3Q9NUD5 404 aaKnown RBP17.81■□□□□ 0.44
DDX54-207ENST00000550016 OLAHQ9NV23 265 aa17.81■□□□□ 0.44
DDX54-207ENST00000550016 FAM120CQ9NX05 1096 aaKnown RBP17.81■□□□□ 0.44
DDX54-207ENST00000550016 OR10H1Q9Y4A9 318 aa17.81■□□□□ 0.44
DDX54-207ENST00000550016 NCKAP5O14513 1909 aa17.8■□□□□ 0.44
DDX54-207ENST00000550016 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms