RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 FRMPD2BQ6IN97 320 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 PRSS48Q7RTY5 328 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 GKN2Q86XP6 184 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 B3GNT7Q8NFL0 401 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 CDS1Q92903 461 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 PDXPQ96GD0 296 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 TM9SF2Q99805 663 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 SLC30A2Q9BRI3 323 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 SLC2A4RGQ9NR83 387 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 GNG8Q9UK08 70 aa14.18□□□□□ -0.14
CUX1-214ENST00000550008 CD8B2A6NJW9 211 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 PPM1DO15297 605 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 ENTPD6O75354 484 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 CLEC3AO75596 197 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 RAB36O95755 333 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 SMIM18P0DKX4 95 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 CD8BP10966 210 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 OSMP13725 252 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 EDNRAP25101 427 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 GNALP38405 381 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 RHAGQ02094 409 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 DEFB133Q30KQ1 61 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 FOXB2Q5VYV0 432 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 FAM109BQ6ICB4 259 aaPredicted RBP14.17□□□□□ -0.14
CUX1-214ENST00000550008 ALKBH2Q6NS38 261 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 LINC00471Q8N535 108 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 PATE1Q8WXA2 126 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 ZDHHC5Q9C0B5 715 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 TRBV4-1A0A0J9YWV2 114 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 KLK8O60259 260 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 LILRB3O75022 631 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 OR2B3O76000 313 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 AIFM1O95831 613 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 ARRB1P49407 418 aaPredicted RBP14.17□□□□□ -0.14
CUX1-214ENST00000550008 CHRNEQ04844 493 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 ELOCQ15369 112 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 LRRC17Q8N6Y2 441 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 PIK3R3Q92569 461 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 SAMD8Q96LT4 415 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 S100A13Q99584 98 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 BEX2Q9BXY8 128 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 BEX1Q9HBH7 125 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 TAS2R7Q9NYW3 318 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 C17orf113A0A1B0GUU1 675 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 PLPP1O14494 284 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 PLD2O14939 933 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 NOS1APO75052 506 aaPredicted RBP14.17□□□□□ -0.14
CUX1-214ENST00000550008 HLA-DPB1P04440 258 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 GIMD1P0DJR0 217 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 SLC2A2P11168 524 aaPredicted RBP14.17□□□□□ -0.14
CUX1-214ENST00000550008 ARPC4P59998 168 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 TUBA1BP68363 451 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 ARHGAP19Q14CB8 494 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 GPR19Q15760 415 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 IRAK1BP1Q5VVH5 260 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 TUBA1AQ71U36 451 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 ZDHHC1Q8WTX9 485 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 THEM6Q8WUY1 208 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 WACQ9BTA9 647 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 ZNF221Q9UK13 617 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 ZFR2Q9UPR6 939 aaKnown RBP14.17□□□□□ -0.14
CUX1-214ENST00000550008 CARD8Q9Y2G2 431 aa14.17□□□□□ -0.14
CUX1-214ENST00000550008 TRBV5-4A0A0C4DH59 114 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 A0A1W2PRG6 482 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 FAM171A2A8MVW0 826 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 CCKBRP32239 447 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 MNDAP41218 407 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 SLC6A12P48065 614 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 OR2B6P58173 313 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 ZNF385BQ569K4 471 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 PAPD5Q8NDF8 572 aaKnown RBP14.16□□□□□ -0.14
CUX1-214ENST00000550008 RIT1Q92963 219 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 OR4K3Q96R72 315 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 ACTRT3Q9BYD9 372 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 PDE7BQ9NP56 450 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 CD207Q9UJ71 328 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 IFT52Q9Y366 437 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 DNMT3AQ9Y6K1 912 aaPredicted RBP14.16□□□□□ -0.14
CUX1-214ENST00000550008 GBX2P52951 348 aaPredicted RBP14.16□□□□□ -0.14
CUX1-214ENST00000550008 SPCS2Q15005 226 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 DUSP7Q16829 419 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 ZNF691Q5VV52 312 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 TMPRSS9Q7Z410 1059 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 BCDIN3DQ7Z5W3 292 aaKnown RBP14.16□□□□□ -0.14
CUX1-214ENST00000550008 SFTPA1Q8IWL2 248 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 CREB3L4Q8TEY5 395 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 TTYH2Q9BSA4 534 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 TAPBPLQ9BX59 468 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 C1QTNF3Q9BXJ4 246 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 MKRN2Q9H000 416 aaKnown RBP14.16□□□□□ -0.14
CUX1-214ENST00000550008 LMAN1LQ9HAT1 526 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 TCF7L1Q9HCS4 588 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 SRA1Q9HD15 236 aaKnown RBP14.16□□□□□ -0.14
CUX1-214ENST00000550008 THAP10Q9P2Z0 257 aaPredicted RBP14.16□□□□□ -0.14
CUX1-214ENST00000550008 ATG4BQ9Y4P1 393 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 GPC6Q9Y625 555 aaPredicted RBP14.16□□□□□ -0.14
CUX1-214ENST00000550008 SPAG17Q6Q759 2223 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 SLC9B1P1A6NJY1 282 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 KRT33AO76009 404 aa14.16□□□□□ -0.14
CUX1-214ENST00000550008 MTNR1AP48039 350 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms