RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 SLC23A2Q9UGH3 650 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 C10orf142B7Z368 130 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 FFAR1O14842 300 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 MYL12BO14950 172 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 PRKNO60260 465 aaPredicted RBP10.45□□□□□ -0.74
LINC00661-204ENST00000549354 GABRB1P18505 474 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 APEX1P27695 318 aaKnown RBP10.45□□□□□ -0.74
LINC00661-204ENST00000549354 TIA1P31483 386 aaKnown RBP eCLIP10.45□□□□□ -0.74
LINC00661-204ENST00000549354 MVDP53602 400 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 PUM1Q14671 1186 aaKnown RBP eCLIP10.45□□□□□ -0.74
LINC00661-204ENST00000549354 IRF4Q15306 451 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 TUBA3EQ6PEY2 450 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 LINC00299Q6ZSB3 139 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 DENND6BQ8NEG7 585 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 ATP6V1C2Q8NEY4 427 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.45□□□□□ -0.74
LINC00661-204ENST00000549354 SCARF2Q96GP6 870 aaPredicted RBP10.45□□□□□ -0.74
LINC00661-204ENST00000549354 IRF2BPLQ9H1B7 796 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 C8orf33Q9H7E9 229 aaPredicted RBP10.45□□□□□ -0.74
LINC00661-204ENST00000549354 MOV10Q9HCE1 1003 aaKnown RBP10.45□□□□□ -0.74
LINC00661-204ENST00000549354 SLAMF7Q9NQ25 335 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 PIPSLA2A3N6 862 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 EGFP01133 1207 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 EIF2S1P05198 315 aaKnown RBP10.45□□□□□ -0.74
LINC00661-204ENST00000549354 HOXC4P09017 264 aaPredicted RBP10.45□□□□□ -0.74
LINC00661-204ENST00000549354 CCNYL3P0C7X3 344 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 ACP5P13686 325 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 PCGF2P35227 344 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 RORCP51449 518 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 MRPS21P82921 87 aaKnown RBP10.45□□□□□ -0.74
LINC00661-204ENST00000549354 TAP2Q03519 686 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 ARHGAP19Q14CB8 494 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 FBXO43Q4G163 708 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 CRTC2Q53ET0 693 aaPredicted RBP10.45□□□□□ -0.74
LINC00661-204ENST00000549354 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.45□□□□□ -0.74
LINC00661-204ENST00000549354 SLC30A8Q8IWU4 369 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 LAS2Q8IYD9 372 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 C16orf78Q8WTQ4 265 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 PIK3R3Q92569 461 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 TSSK6Q9BXA6 273 aa10.45□□□□□ -0.74
LINC00661-204ENST00000549354 ZCCHC3Q9NUD5 404 aaKnown RBP10.45□□□□□ -0.74
LINC00661-204ENST00000549354 NPIPA5A0A0B4J1W7 369 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 NPIPA7E9PJI5 369 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 FOXE1O00358 373 aaPredicted RBP10.44□□□□□ -0.74
LINC00661-204ENST00000549354 MAGEB4O15481 346 aaPredicted RBP10.44□□□□□ -0.74
LINC00661-204ENST00000549354 AKR7A2O43488 359 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 KCNJ13O60928 360 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 NPIPA8P0DM63 369 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 DRD1P21728 446 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 CLCNKAP51800 687 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 SEC13P55735 322 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 CSNK2BP67870 215 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 TEAD4Q15561 434 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 TIMM50Q3ZCQ8 353 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 KLHL12Q53G59 568 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 HIST2H2AA3Q6FI13 130 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 SDE2Q6IQ49 451 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 ZC3H14Q6PJT7 736 aaKnown RBP10.44□□□□□ -0.74
LINC00661-204ENST00000549354 ZNF438Q7Z4V0 828 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 SIMC1Q8NDZ2 872 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 C17orf50Q8WW18 174 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 C16orf58Q96GQ5 468 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 CCDC59Q9P031 241 aaKnown RBP10.44□□□□□ -0.74
LINC00661-204ENST00000549354 CRNNQ9UBG3 495 aaPredicted RBP10.44□□□□□ -0.74
LINC00661-204ENST00000549354 ZNF282Q9UDV7 671 aaPredicted RBP10.44□□□□□ -0.74
LINC00661-204ENST00000549354 SLC17A4Q9Y2C5 497 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 SLC9A8Q9Y2E8 581 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 PLOD3O60568 738 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 COL9A1P20849 921 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 SOX18P35713 384 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 INPP1P49441 399 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 RPS7P62081 194 aaKnown RBP10.44□□□□□ -0.74
LINC00661-204ENST00000549354 ZNF763Q0D2J5 394 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 GPR50Q13585 617 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 ZNF791Q3KP31 576 aaPredicted RBP10.44□□□□□ -0.74
LINC00661-204ENST00000549354 OR4C15Q8NGM1 316 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 ENKURQ8TC29 256 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 SLC38A5Q8WUX1 472 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 MENTQ9BUN1 341 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 OR2B2Q9GZK3 357 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 SLC6A17Q9H1V8 727 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 REEP4Q9H6H4 257 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 KLHL1Q9NR64 748 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 UCKL1Q9NWZ5 548 aa10.44□□□□□ -0.74
LINC00661-204ENST00000549354 SEMA7AO75326 666 aa10.43□□□□□ -0.74
LINC00661-204ENST00000549354 MRPL3P09001 348 aaKnown RBP10.43□□□□□ -0.74
LINC00661-204ENST00000549354 GLULP15104 373 aa10.43□□□□□ -0.74
LINC00661-204ENST00000549354 CD72P21854 359 aa10.43□□□□□ -0.74
LINC00661-204ENST00000549354 KELP23276 732 aa10.43□□□□□ -0.74
LINC00661-204ENST00000549354 HSD17B2P37059 387 aa10.43□□□□□ -0.74
LINC00661-204ENST00000549354 XKP51811 444 aa10.43□□□□□ -0.74
LINC00661-204ENST00000549354 DSTNP60981 165 aa10.43□□□□□ -0.74
LINC00661-204ENST00000549354 GPR19Q15760 415 aa10.43□□□□□ -0.74
LINC00661-204ENST00000549354 NDUFA5Q16718 116 aa10.43□□□□□ -0.74
LINC00661-204ENST00000549354 DCST1Q5T197 706 aa10.43□□□□□ -0.74
LINC00661-204ENST00000549354 ANXA8L1Q5VT79 327 aa10.43□□□□□ -0.74
LINC00661-204ENST00000549354 SLC30A6Q6NXT4 461 aa10.43□□□□□ -0.74
LINC00661-204ENST00000549354 TRIM40Q6P9F5 258 aa10.43□□□□□ -0.74
LINC00661-204ENST00000549354 LCTLQ6UWM7 567 aa10.43□□□□□ -0.74
LINC00661-204ENST00000549354 ZNF367Q7RTV3 350 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms