RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 NUP107P57740 925 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 RNASE9P60153 205 aaKnown RBP4.54□□□□□ -1.68
SCAF11-212ENST00000549162 ESRRGP62508 458 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 SLC36A3Q495N2 470 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 NSUN5P2Q63ZY6 315 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 PTRHD1Q6GMV3 140 aaKnown RBP4.54□□□□□ -1.68
SCAF11-212ENST00000549162 SLC30A6Q6NXT4 461 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 CD200R1LQ6Q8B3 271 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 ADCK1Q86TW2 530 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 ARMC8Q8IUR7 673 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 HIPK4Q8NE63 616 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 HUS1BQ8NHY5 278 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 FNDC8Q8TC99 324 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 HGH1Q9BTY7 390 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 NTN4Q9HB63 628 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 PCMTD2Q9NV79 361 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 SLC13A4Q9UKG4 626 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 SLC39A10Q9ULF5 831 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 SAMD4AQ9UPU9 718 aaKnown RBP4.54□□□□□ -1.68
SCAF11-212ENST00000549162 ERVK-11Q9UQG0 969 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 KLHL20Q9Y2M5 609 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 RNF215Q9Y6U7 377 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 HEATR5BQ9P2D3 2071 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 A0A087WV48 116 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 IRGMA1A4Y4 181 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 DHRS7CA6NNS2 312 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 UBDO15205 165 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 B4GAT1O43505 415 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 HYAL3O43820 417 aaPredicted RBP4.54□□□□□ -1.68
SCAF11-212ENST00000549162 MPZL2O60487 215 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 B4GALT2O60909 372 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 CRHP06850 196 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 SLC35G4P0C7Q5 338 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 CDK5Q00535 292 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 PPARDQ03181 441 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 TOP3AQ13472 1001 aaPredicted RBP4.54□□□□□ -1.68
SCAF11-212ENST00000549162 GRM7Q14831 915 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 SRSF7Q16629 238 aaKnown RBP eCLIP4.54□□□□□ -1.68
SCAF11-212ENST00000549162 ATP6AP1LQ52LC2 224 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 SLC35D3Q5M8T2 416 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 ZNF684Q5T5D7 378 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 ZNF574Q6ZN55 896 aaPredicted RBP4.54□□□□□ -1.68
SCAF11-212ENST00000549162 CMC1Q7Z7K0 106 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 PDSS2Q86YH6 399 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 SFTPA1Q8IWL2 248 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 MICU2Q8IYU8 434 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 NAT16Q8N8M0 369 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 CDRT4Q8N9R6 151 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 RCBTB1Q8NDN9 531 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 Q8NFD4 153 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 ST8SIA1Q92185 356 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 MOCOSQ96EN8 888 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 ZNF649Q9BS31 505 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 CNPPD1Q9BV87 410 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 SPATA5L1Q9BVQ7 753 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 PRDM14Q9GZV8 571 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 SYNPO2LQ9H987 977 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 C3orf14Q9HBI5 128 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 TAS2R9Q9NYW1 312 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 KIF17Q9P2E2 1029 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 FBXL7Q9UJT9 491 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 NDRG4Q9ULP0 352 aaKnown RBP4.54□□□□□ -1.68
SCAF11-212ENST00000549162 CHST2Q9Y4C5 530 aa4.54□□□□□ -1.68
SCAF11-212ENST00000549162 A0A1B0GX78 115 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 SLC35F4A4IF30 521 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 KDM4EB2RXH2 506 aaPredicted RBP4.53□□□□□ -1.68
SCAF11-212ENST00000549162 E7EQ34 232 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 ARPC3O15145 178 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 DUX1O43812 170 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 PTP4A3O75365 173 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 GPR75O95800 540 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 FGF2P09038 288 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 RAP2AP10114 183 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 FMO4P31512 558 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 SLC5A2P31639 672 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 SERPINF1P36955 418 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 P2RY4P51582 365 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 METAP1P53582 386 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 AQP5P55064 265 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 SMIM11AP58511 58 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 PLIN5Q00G26 463 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 RGNQ15493 299 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 MMEL1Q495T6 779 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 EIPR1Q53HC9 387 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 ABHD17BQ5VST6 288 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 FAM151BQ6UXP7 276 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 CDH24Q86UP0 819 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 PIM3Q86V86 326 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 MOGAT3Q86VF5 341 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 C17orf64Q86WR6 236 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 MDS2Q8NDY4 140 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 SPPL2AQ8TCT8 520 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 BLOC1S5Q8TDH9 187 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 TRAF4Q9BUZ4 470 aaPredicted RBP4.53□□□□□ -1.68
SCAF11-212ENST00000549162 ACTRT3Q9BYD9 372 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 SERHL2Q9H4I8 314 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 ACKR4Q9NPB9 350 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 FTSJ1Q9UET6 329 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 FBXL3Q9UKT7 428 aa4.53□□□□□ -1.68
SCAF11-212ENST00000549162 IGHV5-10-1A0A0J9YXX1 117 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms