RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 BTBD2Q9BX70 525 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 ZNF717Q9BY31 904 aaPredicted RBP12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 PEX16Q9Y5Y5 336 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 HELZP42694 1942 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 LRIT2A6NDA9 550 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 TRIM64BA6NI03 449 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 EML2O95834 649 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 LINC00271P0C7V0 271 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 NR2F6P10588 404 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 GIPRP48546 466 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 PCBP3P57721 371 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 OR2B6P58173 313 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 TAS2R38P59533 333 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 STXBP1P61764 594 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 PRDX1Q06830 199 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 HYAL2Q12891 473 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 TMEM240Q5SV17 173 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 GDPD3Q7L5L3 318 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 ABI3BPQ7Z7G0 1075 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 RNFT2Q96EX2 444 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 SPATA9Q9BWV2 254 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 PLA2G2FQ9BZM2 168 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 SMURF1Q9HCE7 757 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 HHATLQ9HCP6 504 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 FBXO8Q9NRD0 319 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 FTSJ1Q9UET6 329 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 CFL2Q9Y281 166 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 RPL36Q9Y3U8 105 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 GPC6Q9Y625 555 aaPredicted RBP12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 PLXNB3Q9ULL4 1909 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 IGKV1-8A0A0C4DH67 115 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 PBX2P40425 430 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 KCNJ5P48544 419 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 PRICKLE2Q7Z3G6 844 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 CAMKMTQ7Z624 323 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 GLCCI1Q86VQ1 547 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 PARGQ86W56 976 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 BBS1Q8NFJ9 593 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 OR51L1Q8NGJ5 315 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 OR2A1Q8NGT9 310 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 POP5Q969H6 163 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 FGF22Q9HCT0 170 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 THSD1Q9NS62 852 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 GPR34Q9UPC5 381 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 B3GNT3Q9Y2A9 372 aa12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 MRPS7Q9Y2R9 242 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-209ENST00000548825 A0A1W2PQL4 384 aaPredicted RBP12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 FABP12A6NFH5 140 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 FGF19O95750 216 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 ADAP00813 363 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 GYPBP06028 91 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 ALOX5P09917 674 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 AHRP35869 848 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 RPS25P62851 125 aaKnown RBP12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 SELENBP1Q13228 472 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 SF3B4Q15427 424 aaKnown RBP eCLIP12.86□□□□□ -0.351e-8■■■■■ 43.8
PRPF40B-209ENST00000548825 NXNL2Q5VZ03 156 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 SAXO2Q658L1 398 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 UNC5DQ6UXZ4 953 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 ZNF367Q7RTV3 350 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 REM2Q8IYK8 340 aaPredicted RBP12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 CYB561A3Q8NBI2 242 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 OR8J1Q8NGP2 316 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 ITFG2Q969R8 447 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 NELL2Q99435 816 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 TTYH2Q9BSA4 534 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 SYNPO2LQ9H987 977 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 FAM25AB3EWG3 89 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 FAM25CB3EWG5 89 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 FAM25GB3EWG6 89 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 REM1O75628 298 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 ZNF888P0CJ79 500 aaPredicted RBP12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 TYRP1P17643 537 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 CSNK2A2P19784 350 aaPredicted RBP12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 HIST1H1TP22492 207 aaPredicted RBP12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 CPN2P22792 545 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 IFNA8P32881 189 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 ETFBKMTQ8IXQ9 262 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 TMIEQ8NEW7 156 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 OR51A7Q8NH64 312 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 CDS1Q92903 461 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 MTERF3Q96E29 417 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 MGAT4BQ9UQ53 548 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 WBP11Q9Y2W2 641 aaKnown RBP12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 CLCA3PQ9Y6N3 262 aa12.86□□□□□ -0.35
PRPF40B-209ENST00000548825 FAAHO00519 579 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 GSTT2P0CG29 244 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 GSTT2BP0CG30 244 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 NT5EP21589 574 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 CD83Q01151 205 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 BAK1Q16611 211 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 CDC73Q6P1J9 531 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 PIK3R3Q92569 461 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 SAP130Q9H0E3 1048 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 SRMSQ9H3Y6 488 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 A0A087WUU8 490 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 A0A1W2PPV9 198 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 ALPPP05187 535 aa12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 SAGP10523 405 aaPredicted RBP12.85□□□□□ -0.35
PRPF40B-209ENST00000548825 TCEA1P23193 301 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms