RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 FAM118AQ9NWS6 357 aa12.57□□□□□ -0.4
PTCH1-215ENST00000547672 TUBA8Q9NY65 449 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-215ENST00000547672 MAT2BQ9NZL9 334 aa12.57□□□□□ -0.4
PTCH1-215ENST00000547672 HCN3Q9P1Z3 774 aa12.57□□□□□ -0.4
PTCH1-215ENST00000547672 BLOC1S6Q9UL45 172 aa12.57□□□□□ -0.4
PTCH1-215ENST00000547672 HCN4Q9Y3Q4 1203 aa12.57□□□□□ -0.4
PTCH1-215ENST00000547672 WDR45Q9Y484 360 aa12.57□□□□□ -0.4
PTCH1-215ENST00000547672 U3KQV3 271 aa12.57□□□□□ -0.4
PTCH1-215ENST00000547672 A0A1B0GX78 115 aa12.56□□□□□ -0.4
PTCH1-215ENST00000547672 TMEM229AB2RXF0 380 aa12.56□□□□□ -0.4
PTCH1-215ENST00000547672 DLGAP1O14490 977 aa12.56□□□□□ -0.4
PTCH1-215ENST00000547672 HCRTR1O43613 425 aa12.56□□□□□ -0.4
PTCH1-215ENST00000547672 DNAJB6O75190 326 aa12.56□□□□□ -0.4
PTCH1-215ENST00000547672 CCNB2O95067 398 aa12.56□□□□□ -0.4
PTCH1-215ENST00000547672 DBIP07108 87 aaKnown RBP12.56□□□□□ -0.4
PTCH1-215ENST00000547672 PABPC4LP0CB38 370 aaKnown RBP12.56□□□□□ -0.4
PTCH1-215ENST00000547672 TNNI3P19429 210 aa12.56□□□□□ -0.4
PTCH1-215ENST00000547672 FBLP22087 321 aaKnown RBP12.56□□□□□ -0.4
PTCH1-215ENST00000547672 IFNGR2P38484 337 aa12.56□□□□□ -0.4
PTCH1-215ENST00000547672 PSMD4P55036 377 aaKnown RBP12.56□□□□□ -0.4
PTCH1-215ENST00000547672 CSNK2BP67870 215 aa12.56□□□□□ -0.4
PTCH1-215ENST00000547672 PSPHP78330 225 aa12.56□□□□□ -0.4
PTCH1-215ENST00000547672 POU6F2P78424 691 aaPredicted RBP12.56□□□□□ -0.4
PTCH1-215ENST00000547672 DUSP8Q13202 625 aa12.56□□□□□ -0.4
PTCH1-215ENST00000547672 KCTD21Q4G0X4 260 aa12.56□□□□□ -0.4
PTCH1-215ENST00000547672 TRMT12Q53H54 448 aaKnown RBP12.56□□□□□ -0.4
PTCH1-215ENST00000547672 KDM4DQ6B0I6 523 aa12.56□□□□□ -0.4
PTCH1-215ENST00000547672 FAHD1Q6P587 224 aa12.56□□□□□ -0.4
PTCH1-215ENST00000547672 QSOX2Q6ZRP7 698 aa12.56□□□□□ -0.4
PTCH1-215ENST00000547672 TTLL10Q6ZVT0 673 aa12.56□□□□□ -0.4
PTCH1-215ENST00000547672 THAP5Q7Z6K1 395 aa12.56□□□□□ -0.4
PTCH1-215ENST00000547672 COX18Q8N8Q8 333 aa12.56□□□□□ -0.4
PTCH1-215ENST00000547672 G6PC3Q9BUM1 346 aa12.56□□□□□ -0.4
PTCH1-215ENST00000547672 AMBRA1Q9C0C7 1298 aa12.56□□□□□ -0.4
PTCH1-215ENST00000547672 FAM192AQ9GZU8 254 aa12.56□□□□□ -0.4
PTCH1-215ENST00000547672 TOR3AQ9H497 397 aa12.56□□□□□ -0.4
PTCH1-215ENST00000547672 SMURF2Q9HAU4 748 aa12.56□□□□□ -0.4
PTCH1-215ENST00000547672 ADAP2Q9NPF8 381 aa12.56□□□□□ -0.4
PTCH1-215ENST00000547672 MRTO4Q9UKD2 239 aaKnown RBP12.56□□□□□ -0.4
PTCH1-215ENST00000547672 POFUT2Q9Y2G5 429 aa12.56□□□□□ -0.4
PTCH1-215ENST00000547672 PCDHGA8Q9Y5G5 932 aa12.56□□□□□ -0.4
PTCH1-215ENST00000547672 LYVE1Q9Y5Y7 322 aa12.56□□□□□ -0.4
PTCH1-215ENST00000547672 CACNA1EQ15878 2313 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 LOC100130705A0A1B0GUX0 176 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 A8MU76 341 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 FAAHO00519 579 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 CLPTM1O96005 669 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 IFNA16P05015 189 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 RPLP0P05388 317 aaKnown RBP12.55□□□□□ -0.4
PTCH1-215ENST00000547672 H1F0P07305 194 aaKnown RBP12.55□□□□□ -0.4
PTCH1-215ENST00000547672 CHRM4P08173 479 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 AVPR2P30518 371 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 RYKP34925 604 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 GRK6P43250 576 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 OR1E2P47887 323 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 CDH12P55289 794 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 TUBA4AP68366 448 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 CCL7P80098 99 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 CFHR1Q03591 330 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 MGAT2Q10469 447 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 KEAP1Q14145 624 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 MAPK11Q15759 364 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 RPS26P11Q5JNZ5 115 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-215ENST00000547672 EXOSC6Q5RKV6 272 aaKnown RBP12.55□□□□□ -0.4
PTCH1-215ENST00000547672 RBM48Q5RL73 367 aaKnown RBP12.55□□□□□ -0.4
PTCH1-215ENST00000547672 DCST1Q5T197 706 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 GUSBP11Q6P575 273 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 ZC3H14Q6PJT7 736 aaKnown RBP12.55□□□□□ -0.4
PTCH1-215ENST00000547672 FAM111BQ6SJ93 734 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 USP51Q70EK9 711 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 ARHGAP22Q7Z5H3 698 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 SLC16A11Q8NCK7 471 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 OR52P1PQ8NH57 321 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 OR1L3Q8NH93 324 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 GPR151Q8TDV0 419 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 HOXB13Q92826 284 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-215ENST00000547672 ZNF501Q96CX3 271 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-215ENST00000547672 ALPK1Q96QP1 1244 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 GFM1Q96RP9 751 aaKnown RBP12.55□□□□□ -0.4
PTCH1-215ENST00000547672 SDF2Q99470 211 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 LMF2Q9BU23 707 aaKnown RBP12.55□□□□□ -0.4
PTCH1-215ENST00000547672 FNDC11Q9BVV2 318 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 SAP130Q9H0E3 1048 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 SLC38A1Q9H2H9 487 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 ANKRD19PQ9H560 264 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 ACER3Q9NUN7 267 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 UBAP1Q9NZ09 502 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 KCND3Q9UK17 655 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 RARRES3Q9UL19 164 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 MGAT4BQ9UQ53 548 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 TESMINQ9Y4I5 508 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 DSPPQ9NZW4 1301 aa12.55□□□□□ -0.4
PTCH1-215ENST00000547672 CUL9Q8IWT3 2517 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 A0A087WXM4 84 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 A0A1W2PRQ8 180 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 H3BMH7 237 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 H3BNH8 94 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 AP3D1O14617 1153 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 UGT2B17O75795 530 aa12.54□□□□□ -0.4
PTCH1-215ENST00000547672 NKX2-2O95096 273 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms