RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 PSG6Q00889 435 aa13.34□□□□□ -0.27
DDX54-203ENST00000546869 CYP27C1Q4G0S4 372 aa13.34□□□□□ -0.27
DDX54-203ENST00000546869 METTL21CQ5VZV1 264 aa13.34□□□□□ -0.27
DDX54-203ENST00000546869 SLC22A10Q63ZE4 541 aa13.34□□□□□ -0.27
DDX54-203ENST00000546869 TMEM198Q66K66 360 aa13.34□□□□□ -0.27
DDX54-203ENST00000546869 ZNF324BQ6AW86 544 aaPredicted RBP13.34□□□□□ -0.27
DDX54-203ENST00000546869 OR4F3Q6IEY1 312 aa13.34□□□□□ -0.27
DDX54-203ENST00000546869 NUP54Q7Z3B4 507 aa13.34□□□□□ -0.27
DDX54-203ENST00000546869 CISD2Q8N5K1 135 aaKnown RBP13.34□□□□□ -0.27
DDX54-203ENST00000546869 CDRT4Q8N9R6 151 aa13.34□□□□□ -0.27
DDX54-203ENST00000546869 POGLUT1Q8NBL1 392 aa13.34□□□□□ -0.27
DDX54-203ENST00000546869 FAM98AQ8NCA5 519 aaKnown RBP13.34□□□□□ -0.27
DDX54-203ENST00000546869 GOT1L1Q8NHS2 421 aaPredicted RBP13.34□□□□□ -0.27
DDX54-203ENST00000546869 CPT1CQ8TCG5 803 aa13.34□□□□□ -0.27
DDX54-203ENST00000546869 SFXN5Q8TD22 340 aa13.34□□□□□ -0.27
DDX54-203ENST00000546869 FAM120BQ96EK7 910 aaKnown RBP13.34□□□□□ -0.27
DDX54-203ENST00000546869 GIMAP5Q96F15 307 aa13.34□□□□□ -0.27
DDX54-203ENST00000546869 ZBTB18Q99592 522 aa13.34□□□□□ -0.27
DDX54-203ENST00000546869 TRIM4Q9C037 500 aa13.34□□□□□ -0.27
DDX54-203ENST00000546869 AGPAT4Q9NRZ5 378 aa13.34□□□□□ -0.27
DDX54-203ENST00000546869 CNIH4Q9P003 139 aa13.34□□□□□ -0.27
DDX54-203ENST00000546869 BTNL2Q9UIR0 455 aa13.34□□□□□ -0.27
DDX54-203ENST00000546869 CHCHD2Q9Y6H1 151 aaPredicted RBP13.34□□□□□ -0.27
DDX54-203ENST00000546869 SLC28A2O43868 658 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 ABCB7O75027 752 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 PPM1BO75688 479 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 C6orf47O95873 294 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 PGRP06401 933 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 ABCB1P08183 1280 aaPredicted RBP13.33□□□□□ -0.28
DDX54-203ENST00000546869 CNR1P21554 472 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 S100A3P33764 101 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 ZFP36L2P47974 494 aaKnown RBP13.33□□□□□ -0.28
DDX54-203ENST00000546869 CCT3P49368 545 aaKnown RBP13.33□□□□□ -0.28
DDX54-203ENST00000546869 MLLT10P55197 1068 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 HBA1P69905 142 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 RPP38P78345 283 aaKnown RBP13.33□□□□□ -0.28
DDX54-203ENST00000546869 TLE1Q04724 770 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 ZNHIT3Q15649 155 aaPredicted RBP13.33□□□□□ -0.28
DDX54-203ENST00000546869 MAPKAPK3Q16644 382 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 FAM174BQ3ZCQ3 159 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 VPS26BQ4G0F5 336 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 SPANXN4Q5MJ08 99 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 TBCELQ5QJ74 424 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 BHLHB9Q6PI77 547 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 MSANTD1Q6ZTZ1 278 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 PRICKLE2Q7Z3G6 844 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 GALNTL5Q7Z4T8 443 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 SULF2Q8IWU5 870 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 SLC34A3Q8N130 599 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 MIER2Q8N344 545 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 BCORP1Q8N888 145 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 NUP43Q8NFH3 380 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 OR56A1Q8NGH5 318 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 FAR1Q8WVX9 515 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 MIB2Q96AX9 1013 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 NTNG2Q96CW9 530 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 SLC35A4Q96G79 324 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 CCDC115Q96NT0 180 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 MS4A4EQ96PG1 132 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 ZNF317Q96PQ6 595 aaPredicted RBP13.33□□□□□ -0.28
DDX54-203ENST00000546869 TAAR6Q96RI8 345 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 CXorf36Q9H7Y0 433 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 SACM1LQ9NTJ5 587 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 LUZP4Q9P127 313 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 PCDHGB4Q9UN71 923 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 CROCCQ5TZA2 2017 aa13.33□□□□□ -0.28
DDX54-203ENST00000546869 OR6C70A6NIJ9 312 aa13.32□□□□□ -0.28
DDX54-203ENST00000546869 PEX1O43933 1283 aa13.32□□□□□ -0.28
DDX54-203ENST00000546869 NKX2-2O95096 273 aa13.32□□□□□ -0.28
DDX54-203ENST00000546869 P04436 131 aa13.32□□□□□ -0.28
DDX54-203ENST00000546869 TROVE2P10155 538 aaKnown RBP eCLIP13.32□□□□□ -0.28
DDX54-203ENST00000546869 ST13P50502 369 aaKnown RBP13.32□□□□□ -0.28
DDX54-203ENST00000546869 PNLIPRP2P54317 469 aa13.32□□□□□ -0.28
DDX54-203ENST00000546869 FOXK1P85037 733 aa13.32□□□□□ -0.28
DDX54-203ENST00000546869 COLEC12Q5KU26 742 aa13.32□□□□□ -0.28
DDX54-203ENST00000546869 FAM180AQ6UWF9 173 aa13.32□□□□□ -0.28
DDX54-203ENST00000546869 NPSR1Q6W5P4 371 aa13.32□□□□□ -0.28
DDX54-203ENST00000546869 FBXW8Q8N3Y1 598 aa13.32□□□□□ -0.28
DDX54-203ENST00000546869 ZFP62Q8NB50 900 aaPredicted RBP13.32□□□□□ -0.28
DDX54-203ENST00000546869 RFWD2Q8NHY2 731 aa13.32□□□□□ -0.28
DDX54-203ENST00000546869 SPPL2AQ8TCT8 520 aa13.32□□□□□ -0.28
DDX54-203ENST00000546869 MAGED4Q96JG8 741 aa13.32□□□□□ -0.28
DDX54-203ENST00000546869 HES7Q9BYE0 225 aa13.32□□□□□ -0.28
DDX54-203ENST00000546869 RABEP2Q9H5N1 569 aa13.32□□□□□ -0.28
DDX54-203ENST00000546869 Q9N2J8 555 aa13.32□□□□□ -0.28
DDX54-203ENST00000546869 NPHS2Q9NP85 383 aa13.32□□□□□ -0.28
DDX54-203ENST00000546869 KLHL1Q9NR64 748 aa13.32□□□□□ -0.28
DDX54-203ENST00000546869 ZCCHC3Q9NUD5 404 aaKnown RBP13.32□□□□□ -0.28
DDX54-203ENST00000546869 FGFR1OP2Q9NVK5 253 aa13.32□□□□□ -0.28
DDX54-203ENST00000546869 ASF1BQ9NVP2 202 aa13.32□□□□□ -0.28
DDX54-203ENST00000546869 MRTO4Q9UKD2 239 aaKnown RBP13.32□□□□□ -0.28
DDX54-203ENST00000546869 TRIM33Q9UPN9 1127 aa13.32□□□□□ -0.28
DDX54-203ENST00000546869 NTNG1Q9Y2I2 539 aa13.32□□□□□ -0.28
DDX54-203ENST00000546869 ZNF462Q96JM2 2506 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 FAM234BA2RU67 622 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 CFLARO15519 480 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 TSPAN2O60636 221 aa13.31□□□□□ -0.28
DDX54-203ENST00000546869 HMGN2P05204 90 aaKnown RBP13.31□□□□□ -0.28
DDX54-203ENST00000546869 VIMP08670 466 aaKnown RBP13.31□□□□□ -0.28
DDX54-203ENST00000546869 KRT16P08779 473 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms