RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 BTNL10A8MVZ5 291 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 NPIPB9F8W1W9 429 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 H7C417 338 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 K7ERU9 68 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 ACKR2O00590 384 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 PDXKO00764 312 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 PDCD5O14737 125 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 ARPC3O15145 178 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 RNF13O43567 381 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 TLX3O43711 291 aaPredicted RBP4.87□□□□□ -1.63
UBE4A-203ENST00000545354 CDC14BO60729 498 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 RAD17O75943 681 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 DDAH1O94760 285 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 UCHL3P15374 230 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 CSNK2A2P19784 350 aaPredicted RBP4.87□□□□□ -1.63
UBE4A-203ENST00000545354 TACR2P21452 398 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 CERS1P27544 350 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 IDH2P48735 452 aaKnown RBP4.87□□□□□ -1.63
UBE4A-203ENST00000545354 NPY4RP50391 375 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 PRELPP51888 382 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 NDUFA8P51970 172 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 GABARAPL2P60520 117 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 CCL7P80098 99 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 PITPNAQ00169 270 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 CCNIQ14094 377 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 SLC29A2Q14542 456 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 PTPRCAPQ14761 206 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 MAN2A1Q16706 1144 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 VMACQ2NL98 169 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 PTCHD3Q3KNS1 767 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 PRAMEF14Q5SWL7 426 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 HIST2H3PS2Q5TEC6 136 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 OR2G6Q5TZ20 316 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 STEAP4Q687X5 459 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 OVOS1Q6IE37 1185 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 LRRC8EQ6NSJ5 796 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 TMEM108Q6UXF1 575 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 TMPRSS7Q7RTY8 843 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 TSPAN33Q86UF1 283 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 NAA40Q86UY6 237 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 UNC93AQ86WB7 457 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 CPNE9Q8IYJ1 553 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 YIPF7Q8N8F6 280 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 SMG8Q8ND04 991 aaKnown RBP4.87□□□□□ -1.63
UBE4A-203ENST00000545354 TMEM161BQ8NDZ6 487 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 OR4K14Q8NGD5 310 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 OR5L2Q8NGL0 311 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 OR8J1Q8NGP2 316 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 OR13J1Q8NGT2 312 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 OR11L1Q8NGX0 322 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 FAM174AQ8TBP5 190 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 ZNF431Q8TF32 576 aaPredicted RBP4.87□□□□□ -1.63
UBE4A-203ENST00000545354 SCARB1Q8WTV0 552 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 CYGBQ8WWM9 190 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 ASB11Q8WXH4 323 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 C11orf40Q8WZ69 217 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 GPKOWQ92917 476 aaPredicted RBP eCLIP4.87□□□□□ -1.63
UBE4A-203ENST00000545354 ERGIC1Q969X5 290 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 FKBP10Q96AY3 582 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 SAT2Q96F10 170 aaPredicted RBP4.87□□□□□ -1.63
UBE4A-203ENST00000545354 LRRC46Q96FV0 321 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 OTUB1Q96FW1 271 aaPredicted RBP4.87□□□□□ -1.63
UBE4A-203ENST00000545354 CMTM7Q96FZ5 175 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 ZNF354BQ96LW1 612 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 KLHDC3Q9BQ90 382 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 GINS4Q9BRT9 223 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 DPH7Q9BTV6 452 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 ARV1Q9H2C2 271 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 PPIL3Q9H2H8 161 aaKnown RBP4.87□□□□□ -1.63
UBE4A-203ENST00000545354 CNTD2Q9H8S5 307 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 SLC52A2Q9HAB3 445 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 SMURF1Q9HCE7 757 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 XPNPEP3Q9NQH7 507 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 SPANXA1Q9NS26 97 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 PGPEP1Q9NXJ5 209 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 ADA2Q9NZK5 511 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 PAK5Q9P286 719 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 GULP1Q9UBP9 304 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 COPS7AQ9UBW8 275 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 SIX4Q9UIU6 781 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 CTNND2Q9UQB3 1225 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 RNF11Q9Y3C5 154 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 PCDHA11Q9Y5I1 949 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 TNFRSF18Q9Y5U5 241 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 V9GYS6 101 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 NOS1P29475 1434 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 ADAMTS13Q76LX8 1427 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 KIAA1217Q5T5P2 1943 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 PALLDQ8WX93 1383 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 A0A1B0GVI7 797 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 NKX6-3A6NJ46 265 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 YDJCA8MPS7 323 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 ANHXE9PGG2 379 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 AP4M1O00189 453 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 ATXN7O15265 892 aaPredicted RBP4.87□□□□□ -1.63
UBE4A-203ENST00000545354 INPP4BO15327 924 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 MSH4O15457 936 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 VPS26AO75436 327 aa4.87□□□□□ -1.63
UBE4A-203ENST00000545354 LYPLA1O75608 230 aaPredicted RBP4.87□□□□□ -1.63
UBE4A-203ENST00000545354 OR2J2O76002 312 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms