RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 SERHLQ9NQF3 203 aa12.86□□□□□ -0.35
DDX11-228ENST00000545115 EHD3Q9NZN3 535 aa12.86□□□□□ -0.35
DDX11-228ENST00000545115 TRPS1Q9UHF7 1281 aa12.86□□□□□ -0.35
DDX11-228ENST00000545115 EXO1Q9UQ84 846 aaKnown RBP12.86□□□□□ -0.35
DDX11-228ENST00000545115 ZNF780BQ9Y6R6 833 aa12.86□□□□□ -0.35
DDX11-228ENST00000545115 KIAA1549Q9HCM3 1950 aa12.86□□□□□ -0.35
DDX11-228ENST00000545115 C2orf72A6NCS6 295 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 A8MT66 165 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 H0Y3Z8 333 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 PPP6CO00743 305 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 TO15178 435 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 ABCB7O75027 752 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 ERN1O75460 977 aaKnown RBP12.85□□□□□ -0.35
DDX11-228ENST00000545115 RAF1P04049 648 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 DRD5P21918 477 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 SLCO1A2P46721 670 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 ALDH9A1P49189 494 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 EMDP50402 254 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 CDH13P55290 713 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 MRPS35P82673 323 aaKnown RBP12.85□□□□□ -0.35
DDX11-228ENST00000545115 DUSP2Q05923 314 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 FOXD4Q12950 439 aaPredicted RBP12.85□□□□□ -0.35
DDX11-228ENST00000545115 LTB4RQ15722 352 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 FAM180BQ6P0A1 224 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 ADGRE4PQ86SQ3 457 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 IFNEQ86WN2 208 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 WDSUB1Q8N9V3 476 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 OR14L1PQ8NHC6 308 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 DTNBP1Q96EV8 351 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 ZNF681Q96N22 645 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 HBEGFQ99075 208 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 TM9SF2Q99805 663 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 TUBA1CQ9BQE3 449 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 SFXN3Q9BWM7 321 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 OR2B2Q9GZK3 357 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 TSPYL1Q9H0U9 437 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 ACBD3Q9H3P7 528 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 VPS29Q9UBQ0 182 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 ZNF180Q9UJW8 692 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 UTS2RQ9UKP6 389 aa12.85□□□□□ -0.35
DDX11-228ENST00000545115 ZNF469Q96JG9 3925 aaPredicted RBP12.84□□□□□ -0.35
DDX11-228ENST00000545115 NF1P21359 2839 aa12.84□□□□□ -0.35
DDX11-228ENST00000545115 OR6C70A6NIJ9 312 aa12.84□□□□□ -0.35
DDX11-228ENST00000545115 CLCA1A8K7I4 914 aa12.84□□□□□ -0.35
DDX11-228ENST00000545115 TRIM49D1C9J1S8 452 aa12.84□□□□□ -0.35
DDX11-228ENST00000545115 BCAS2O75934 225 aaPredicted RBP12.84□□□□□ -0.35
DDX11-228ENST00000545115 OR4F21O95013 312 aa12.84□□□□□ -0.35
DDX11-228ENST00000545115 SBK3P0C264 359 aa12.84□□□□□ -0.35
DDX11-228ENST00000545115 HSD3B1P14060 373 aa12.84□□□□□ -0.35
DDX11-228ENST00000545115 PCSK2P16519 638 aa12.84□□□□□ -0.35
DDX11-228ENST00000545115 TSPAN8P19075 237 aa12.84□□□□□ -0.35
DDX11-228ENST00000545115 HSD3B2P26439 372 aa12.84□□□□□ -0.35
DDX11-228ENST00000545115 SRYQ05066 204 aa12.84□□□□□ -0.35
DDX11-228ENST00000545115 KEAP1Q14145 624 aa12.84□□□□□ -0.35
DDX11-228ENST00000545115 SCIMPQ6UWF3 145 aa12.84□□□□□ -0.35
DDX11-228ENST00000545115 PLCZ1Q86YW0 608 aa12.84□□□□□ -0.35
DDX11-228ENST00000545115 TRIM42Q8IWZ5 723 aa12.84□□□□□ -0.35
DDX11-228ENST00000545115 RDH11Q8TC12 318 aa12.84□□□□□ -0.35
DDX11-228ENST00000545115 ZNF675Q8TD23 568 aa12.84□□□□□ -0.35
DDX11-228ENST00000545115 ERP27Q96DN0 273 aa12.84□□□□□ -0.35
DDX11-228ENST00000545115 COL21A1Q96P44 957 aa12.84□□□□□ -0.35
DDX11-228ENST00000545115 BTBD9Q96Q07 612 aa12.84□□□□□ -0.35
DDX11-228ENST00000545115 UCN2Q96RP3 112 aa12.84□□□□□ -0.35
DDX11-228ENST00000545115 YIPF4Q9BSR8 244 aa12.84□□□□□ -0.35
DDX11-228ENST00000545115 RBM24Q9BX46 236 aaKnown RBP12.84□□□□□ -0.35
DDX11-228ENST00000545115 PFDN4Q9NQP4 134 aa12.84□□□□□ -0.35
DDX11-228ENST00000545115 MCM8Q9UJA3 840 aa12.84□□□□□ -0.35
DDX11-228ENST00000545115 ZNF225Q9UK10 706 aa12.84□□□□□ -0.35
DDX11-228ENST00000545115 GPR55Q9Y2T6 319 aaPredicted RBP12.84□□□□□ -0.35
DDX11-228ENST00000545115 WIF1Q9Y5W5 379 aa12.84□□□□□ -0.35
DDX11-228ENST00000545115 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.84□□□□□ -0.35
DDX11-228ENST00000545115 DOCK7Q96N67 2140 aa12.83□□□□□ -0.35
DDX11-228ENST00000545115 POC1B-GALNT4F8VUJ3 575 aa12.83□□□□□ -0.36
DDX11-228ENST00000545115 REM1O75628 298 aa12.83□□□□□ -0.36
DDX11-228ENST00000545115 RCBTB2O95199 551 aa12.83□□□□□ -0.36
DDX11-228ENST00000545115 ATE1O95260 518 aa12.83□□□□□ -0.36
DDX11-228ENST00000545115 ESRRBO95718 433 aa12.83□□□□□ -0.36
DDX11-228ENST00000545115 KRT6AP02538 564 aa12.83□□□□□ -0.36
DDX11-228ENST00000545115 KRT6BP04259 564 aa12.83□□□□□ -0.36
DDX11-228ENST00000545115 FOSL1P15407 271 aa12.83□□□□□ -0.36
DDX11-228ENST00000545115 CHMP24386 653 aa12.83□□□□□ -0.36
DDX11-228ENST00000545115 SRD5A2P31213 254 aa12.83□□□□□ -0.36
DDX11-228ENST00000545115 HSD17B3P37058 310 aa12.83□□□□□ -0.36
DDX11-228ENST00000545115 CPA2P48052 419 aa12.83□□□□□ -0.36
DDX11-228ENST00000545115 KRT6CP48668 564 aa12.83□□□□□ -0.36
DDX11-228ENST00000545115 GFRA1P56159 465 aa12.83□□□□□ -0.36
DDX11-228ENST00000545115 ADAM8P78325 824 aa12.83□□□□□ -0.36
DDX11-228ENST00000545115 HMGCS1Q01581 520 aa12.83□□□□□ -0.36
DDX11-228ENST00000545115 CLCQ05315 142 aa12.83□□□□□ -0.36
DDX11-228ENST00000545115 FOXF2Q12947 444 aa12.83□□□□□ -0.36
DDX11-228ENST00000545115 CSTF3Q12996 717 aaKnown RBP12.83□□□□□ -0.36
DDX11-228ENST00000545115 RASA2Q15283 850 aa12.83□□□□□ -0.36
DDX11-228ENST00000545115 DEFB113Q30KQ7 82 aa12.83□□□□□ -0.36
DDX11-228ENST00000545115 ZNF628Q5EBL2 1059 aa12.83□□□□□ -0.36
DDX11-228ENST00000545115 AAGABQ6PD74 315 aa12.83□□□□□ -0.36
DDX11-228ENST00000545115 LUZP2Q86TE4 346 aa12.83□□□□□ -0.36
DDX11-228ENST00000545115 SAMD14Q8IZD0 417 aaPredicted RBP12.83□□□□□ -0.36
DDX11-228ENST00000545115 TMEM151AQ8N4L1 468 aa12.83□□□□□ -0.36
DDX11-228ENST00000545115 CDYL2Q8N8U2 506 aa12.83□□□□□ -0.36
DDX11-228ENST00000545115 DCAKDQ8WVC6 231 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms