RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 RGMAQ96B86 450 aa8.44□□□□□ -1.06
CHD4-212ENST00000545083 PINK1Q9BXM7 581 aa8.44□□□□□ -1.06
CHD4-212ENST00000545083 BEX2Q9BXY8 128 aa8.44□□□□□ -1.06
CHD4-212ENST00000545083 ITPAQ9BY32 194 aa8.44□□□□□ -1.06
CHD4-212ENST00000545083 PRM3Q9NNZ6 103 aa8.44□□□□□ -1.06
CHD4-212ENST00000545083 LIPT1Q9Y234 373 aa8.44□□□□□ -1.06
CHD4-212ENST00000545083 KCNAB3O43448 404 aa8.43□□□□□ -1.06
CHD4-212ENST00000545083 WISP3O95389 354 aaPredicted RBP8.43□□□□□ -1.06
CHD4-212ENST00000545083 FAM58BPP0C7Q3 252 aa8.43□□□□□ -1.06
CHD4-212ENST00000545083 EPB42P16452 691 aa8.43□□□□□ -1.06
CHD4-212ENST00000545083 NT5EP21589 574 aa8.43□□□□□ -1.06
CHD4-212ENST00000545083 ZNF75DP51815 510 aa8.43□□□□□ -1.06
CHD4-212ENST00000545083 RAP1GDS1P52306 607 aa8.43□□□□□ -1.06
CHD4-212ENST00000545083 MGAT2Q10469 447 aa8.43□□□□□ -1.06
CHD4-212ENST00000545083 FAPQ12884 760 aa8.43□□□□□ -1.06
CHD4-212ENST00000545083 EXOSC7Q15024 291 aaKnown RBP8.43□□□□□ -1.06
CHD4-212ENST00000545083 OR4D1Q15615 310 aa8.43□□□□□ -1.06
CHD4-212ENST00000545083 CYP1B1Q16678 543 aa8.43□□□□□ -1.06
CHD4-212ENST00000545083 HP1BP3Q5SSJ5 553 aaPredicted RBP8.43□□□□□ -1.06
CHD4-212ENST00000545083 ADAM5Q6NVV9 412 aa8.43□□□□□ -1.06
CHD4-212ENST00000545083 MED27Q6P2C8 311 aa8.43□□□□□ -1.06
CHD4-212ENST00000545083 FAM214BQ7L5A3 538 aa8.43□□□□□ -1.06
CHD4-212ENST00000545083 CHMP1BQ7LBR1 199 aa8.43□□□□□ -1.06
CHD4-212ENST00000545083 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.43□□□□□ -1.06
CHD4-212ENST00000545083 MILR1Q7Z6M3 343 aa8.43□□□□□ -1.06
CHD4-212ENST00000545083 ATG4DQ86TL0 474 aaPredicted RBP8.43□□□□□ -1.06
CHD4-212ENST00000545083 PPIL6Q8IXY8 311 aa8.43□□□□□ -1.06
CHD4-212ENST00000545083 TCAIMQ8N3R3 496 aa8.43□□□□□ -1.06
CHD4-212ENST00000545083 HUS1BQ8NHY5 278 aa8.43□□□□□ -1.06
CHD4-212ENST00000545083 REPS1Q96D71 796 aa8.43□□□□□ -1.06
CHD4-212ENST00000545083 CFAP36Q96G28 342 aa8.43□□□□□ -1.06
CHD4-212ENST00000545083 KCNK17Q96T54 332 aa8.43□□□□□ -1.06
CHD4-212ENST00000545083 MTERF1Q99551 399 aaKnown RBP8.43□□□□□ -1.06
CHD4-212ENST00000545083 DERL2Q9GZP9 239 aa8.43□□□□□ -1.06
CHD4-212ENST00000545083 CNOT10Q9H9A5 744 aaKnown RBP8.43□□□□□ -1.06
CHD4-212ENST00000545083 TMEM160Q9NX00 188 aa8.43□□□□□ -1.06
CHD4-212ENST00000545083 LYARQ9NX58 379 aaKnown RBP8.43□□□□□ -1.06
CHD4-212ENST00000545083 DKKL1Q9UK85 242 aa8.43□□□□□ -1.06
CHD4-212ENST00000545083 EFCAB8A8MWE9 144 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 CLOCKO15516 846 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 SEC14L5O43304 696 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 TNFRSF21O75509 655 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 AQP8O94778 261 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 CD8AP01732 235 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 GBAP04062 536 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 PEPDP12955 493 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 PPP3CBP16298 524 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 DPP4P27487 766 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 THBS2P35442 1172 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 GAS1P54826 345 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 CLDN20P56880 219 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 PON3Q15166 354 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 PGGHGQ32M88 737 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 OR52E8Q6IFG1 317 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 SULT1C3Q6IMI6 304 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 ALKBH2Q6NS38 261 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 FAM111BQ6SJ93 734 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 PDPRQ8NCN5 879 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 OR7G1Q8NGA0 311 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 OR5M1Q8NGP8 315 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 SMAP2Q8WU79 429 aaPredicted RBP8.42□□□□□ -1.06
CHD4-212ENST00000545083 UBE2E3Q969T4 207 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 FBXW5Q969U6 566 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 MAGOHBQ96A72 148 aaKnown RBP8.42□□□□□ -1.06
CHD4-212ENST00000545083 LCORQ96JN0 433 aaPredicted RBP8.42□□□□□ -1.06
CHD4-212ENST00000545083 NTMT1Q9BV86 223 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 PLA2G12AQ9BZM1 189 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 ACTR6Q9GZN1 396 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 DDX31Q9H8H2 851 aaKnown RBP8.42□□□□□ -1.06
CHD4-212ENST00000545083 LRTM1Q9HBL6 345 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 PLSCR4Q9NRQ2 329 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 CD274Q9NZQ7 290 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 CLEC4AQ9UMR7 237 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 CHMP2BQ9UQN3 213 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 MRPS18CQ9Y3D5 142 aaKnown RBP8.42□□□□□ -1.06
CHD4-212ENST00000545083 ZNF175Q9Y473 711 aa8.42□□□□□ -1.06
CHD4-212ENST00000545083 FREM1Q5H8C1 2179 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 ACOX3O15254 700 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 SSX4O60224 188 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 CBX7O95931 251 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 CPMP14384 443 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 CD1DP15813 335 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 GRK2P25098 689 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 PIK3R1P27986 724 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 SERPINB1P30740 379 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 ELK3P41970 407 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 PIK3CBP42338 1070 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 SLC6A8P48029 635 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 XKP51811 444 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 NEK2P51955 445 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 CASP9P55211 416 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 VLDLRP98155 873 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 FGFBP1Q14512 234 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 CTU2Q2VPK5 515 aaKnown RBP8.41□□□□□ -1.06
CHD4-212ENST00000545083 CDKL4Q5MAI5 379 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 GRHL2Q6ISB3 625 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 CCDC137Q6PK04 289 aaKnown RBP8.41□□□□□ -1.06
CHD4-212ENST00000545083 CYP20A1Q6UW02 462 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 IL17RELQ6ZVW7 336 aa8.41□□□□□ -1.06
CHD4-212ENST00000545083 LRRC70Q7Z2Q7 622 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms