RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 CCDC116Q8IYX3 515 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 ST13P4Q8IZP2 240 aaPredicted RBP11.53□□□□□ -0.56
ACTN1-206ENST00000544964 GHDCQ8N2G8 530 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 LRRC25Q8N386 305 aaPredicted RBP11.53□□□□□ -0.56
ACTN1-206ENST00000544964 HORMAD2Q8N7B1 307 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 ACBD4Q8NC06 268 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 PTPMT1Q8WUK0 201 aaPredicted RBP11.53□□□□□ -0.56
ACTN1-206ENST00000544964 C10orf82Q8WW14 230 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 STON2Q8WXE9 905 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 MTERF3Q96E29 417 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 BBS4Q96RK4 519 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 DMRTA2Q96SC8 542 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 BRINP2Q9C0B6 783 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 NSRP1Q9H0G5 558 aaKnown RBP11.53□□□□□ -0.56
ACTN1-206ENST00000544964 RUBCNLQ9H714 662 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 ADAP2Q9NPF8 381 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 TAS2R7Q9NYW3 318 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 CLCA3PQ9Y6N3 262 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 EML6Q6ZMW3 1958 aa11.53□□□□□ -0.56
ACTN1-206ENST00000544964 MED13LQ71F56 2210 aa11.52□□□□□ -0.56
ACTN1-206ENST00000544964 HCFC1P51610 2035 aa11.52□□□□□ -0.56
ACTN1-206ENST00000544964 PHF3Q92576 2039 aaKnown RBP11.52□□□□□ -0.56
ACTN1-206ENST00000544964 HRKO00198 91 aa11.52□□□□□ -0.57
ACTN1-206ENST00000544964 PDPK1O15530 556 aa11.52□□□□□ -0.57
ACTN1-206ENST00000544964 TBX19O60806 448 aa11.52□□□□□ -0.57
ACTN1-206ENST00000544964 CLDN14O95500 239 aa11.52□□□□□ -0.57
ACTN1-206ENST00000544964 CT62P0C5K7 136 aa11.52□□□□□ -0.57
ACTN1-206ENST00000544964 ESRRAP11474 423 aaPredicted RBP11.52□□□□□ -0.57
ACTN1-206ENST00000544964 NTSP30990 170 aa11.52□□□□□ -0.57
ACTN1-206ENST00000544964 RPL3P39023 403 aaKnown RBP11.52□□□□□ -0.57
ACTN1-206ENST00000544964 CYB561P49447 251 aa11.52□□□□□ -0.57
ACTN1-206ENST00000544964 HLCSP50747 726 aa11.52□□□□□ -0.57
ACTN1-206ENST00000544964 NCBP2P52298 156 aaKnown RBP eCLIP11.52□□□□□ -0.57
ACTN1-206ENST00000544964 SMSP52788 366 aa11.52□□□□□ -0.57
ACTN1-206ENST00000544964 STX1BP61266 288 aa11.52□□□□□ -0.57
ACTN1-206ENST00000544964 BIKQ13323 160 aa11.52□□□□□ -0.57
ACTN1-206ENST00000544964 LTB4RQ15722 352 aa11.52□□□□□ -0.57
ACTN1-206ENST00000544964 CEBPEQ15744 281 aa11.52□□□□□ -0.57
ACTN1-206ENST00000544964 CPTPQ5TA50 214 aa11.52□□□□□ -0.57
ACTN1-206ENST00000544964 OR4F3Q6IEY1 312 aa11.52□□□□□ -0.57
ACTN1-206ENST00000544964 PAOXQ6QHF9 649 aa11.52□□□□□ -0.57
ACTN1-206ENST00000544964 FAM111BQ6SJ93 734 aa11.52□□□□□ -0.57
ACTN1-206ENST00000544964 C3P1Q6ZMU1 363 aa11.52□□□□□ -0.57
ACTN1-206ENST00000544964 DOLPP1Q86YN1 238 aa11.52□□□□□ -0.57
ACTN1-206ENST00000544964 FAM9CQ8IZT9 166 aa11.52□□□□□ -0.57
ACTN1-206ENST00000544964 MIER2Q8N344 545 aa11.52□□□□□ -0.57
ACTN1-206ENST00000544964 ZNF321PQ8N8H1 164 aa11.52□□□□□ -0.57
ACTN1-206ENST00000544964 FAM98AQ8NCA5 519 aaKnown RBP11.52□□□□□ -0.57
ACTN1-206ENST00000544964 ADCY4Q8NFM4 1077 aa11.52□□□□□ -0.57
ACTN1-206ENST00000544964 OR9I1Q8NGQ6 314 aa11.52□□□□□ -0.57
ACTN1-206ENST00000544964 OR9A2Q8NGT5 310 aa11.52□□□□□ -0.57
ACTN1-206ENST00000544964 OR14A16Q8NHC5 309 aa11.52□□□□□ -0.57
ACTN1-206ENST00000544964 PHF10Q8WUB8 498 aaKnown RBP11.52□□□□□ -0.57
ACTN1-206ENST00000544964 RIT1Q92963 219 aa11.52□□□□□ -0.57
ACTN1-206ENST00000544964 PELOQ9BRX2 385 aaKnown RBP11.52□□□□□ -0.57
ACTN1-206ENST00000544964 CNPPD1Q9BV87 410 aa11.52□□□□□ -0.57
ACTN1-206ENST00000544964 GLIPR2Q9H4G4 154 aa11.52□□□□□ -0.57
ACTN1-206ENST00000544964 SDR39U1Q9NRG7 319 aaPredicted RBP11.52□□□□□ -0.57
ACTN1-206ENST00000544964 ANKHD1Q8IWZ3 2542 aaKnown RBP11.51□□□□□ -0.57
ACTN1-206ENST00000544964 TRBV11-1A0A0K0K1C0 115 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 SYNDIG1LA6NDD5 238 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 SHOX2O60902 331 aaPredicted RBP11.51□□□□□ -0.57
ACTN1-206ENST00000544964 SLC22A3O75751 556 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 ATP1B1P05026 303 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 ABOP16442 354 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 GPX3P22352 226 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 MPIP34949 423 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 RFC3P40938 356 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 MEOX1P50221 254 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 DGKQP52824 942 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 CLNS1AP54105 237 aaKnown RBP11.51□□□□□ -0.57
ACTN1-206ENST00000544964 C21orf58P58505 322 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 MRPS35P82673 323 aaKnown RBP11.51□□□□□ -0.57
ACTN1-206ENST00000544964 ZNF267Q14586 743 aaPredicted RBP11.51□□□□□ -0.57
ACTN1-206ENST00000544964 TERF2Q15554 542 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 PRICKLE4Q2TBC4 344 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 SPANXN4Q5MJ08 99 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 ZNF551Q7Z340 670 aaPredicted RBP11.51□□□□□ -0.57
ACTN1-206ENST00000544964 GALNT12Q8IXK2 581 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 SAMD14Q8IZD0 417 aaPredicted RBP11.51□□□□□ -0.57
ACTN1-206ENST00000544964 C7orf57Q8NEG2 295 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 B3GNT7Q8NFL0 401 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 SLC2A12Q8TD20 617 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 KAT2AQ92830 837 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 DAZLQ92904 295 aaKnown RBP11.51□□□□□ -0.57
ACTN1-206ENST00000544964 NCLNQ969V3 563 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 COQ8BQ96D53 544 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 ZNF764Q96H86 408 aaPredicted RBP11.51□□□□□ -0.57
ACTN1-206ENST00000544964 AMDHD1Q96NU7 426 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 ZBTB18Q99592 522 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 PRPF18Q99633 342 aaKnown RBP11.51□□□□□ -0.57
ACTN1-206ENST00000544964 DUSP26Q9BV47 211 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 OR8D2Q9GZM6 311 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 CXorf21Q9HAI6 301 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 ATAD3AQ9NVI7 634 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 MAT2BQ9NZL9 334 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 ZIM2Q9NZV7 527 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 PPIEQ9UNP9 301 aaKnown RBP11.51□□□□□ -0.57
ACTN1-206ENST00000544964 TRIM33Q9UPN9 1127 aa11.51□□□□□ -0.57
ACTN1-206ENST00000544964 MAPRE3Q9UPY8 281 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms