RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 CD46P15529 392 aa13.91□□□□□ -0.18
CD9-210ENST00000543916 NME2P22392 152 aa13.91□□□□□ -0.18
CD9-210ENST00000543916 ABCD3P28288 659 aa13.91□□□□□ -0.18
CD9-210ENST00000543916 MLLT10P55197 1068 aa13.91□□□□□ -0.18
CD9-210ENST00000543916 NRG3P56975 720 aa13.91□□□□□ -0.18
CD9-210ENST00000543916 STX1BP61266 288 aa13.91□□□□□ -0.18
CD9-210ENST00000543916 PSG6Q00889 435 aa13.91□□□□□ -0.18
CD9-210ENST00000543916 C19orf57Q0VDD7 668 aa13.91□□□□□ -0.18
CD9-210ENST00000543916 ANXA8L1Q5VT79 327 aa13.91□□□□□ -0.18
CD9-210ENST00000543916 SLC25A25Q6KCM7 469 aa13.91□□□□□ -0.18
CD9-210ENST00000543916 RPUSD3Q6P087 351 aaKnown RBP13.91□□□□□ -0.18
CD9-210ENST00000543916 RTL4Q6ZR62 310 aa13.91□□□□□ -0.18
CD9-210ENST00000543916 PRICKLE2Q7Z3G6 844 aa13.91□□□□□ -0.18
CD9-210ENST00000543916 SLC44A2Q8IWA5 706 aaPredicted RBP13.91□□□□□ -0.18
CD9-210ENST00000543916 OR4A15Q8NGL6 344 aa13.91□□□□□ -0.18
CD9-210ENST00000543916 OR5AK3PQ8NH89 298 aa13.91□□□□□ -0.18
CD9-210ENST00000543916 HSPBAP1Q96EW2 488 aa13.91□□□□□ -0.18
CD9-210ENST00000543916 C5orf34Q96MH7 638 aa13.91□□□□□ -0.18
CD9-210ENST00000543916 MS4A4EQ96PG1 132 aa13.91□□□□□ -0.18
CD9-210ENST00000543916 ZNF385DQ9H6B1 395 aa13.91□□□□□ -0.18
CD9-210ENST00000543916 NEUROD4Q9HD90 331 aa13.91□□□□□ -0.18
CD9-210ENST00000543916 FAM120CQ9NX05 1096 aaKnown RBP13.91□□□□□ -0.18
CD9-210ENST00000543916 PCDHGB6Q9Y5F9 930 aa13.91□□□□□ -0.18
CD9-210ENST00000543916 TTLL8A6PVC2 850 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 TO15178 435 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 ACOX3O15254 700 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 CPSF4O95639 269 aaKnown RBP13.9□□□□□ -0.18
CD9-210ENST00000543916 CCL3P10147 92 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 CD1EP15812 388 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 NCF2P19878 526 aaPredicted RBP13.9□□□□□ -0.18
CD9-210ENST00000543916 SOAT1P35610 550 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 MAP3K8P41279 467 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 CCT3P49368 545 aaKnown RBP13.9□□□□□ -0.18
CD9-210ENST00000543916 ATP4BP51164 291 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 POLR2JP52435 117 aaKnown RBP13.9□□□□□ -0.18
CD9-210ENST00000543916 SEC24CP53992 1094 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 FBXW4P57775 412 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 PRR5P85299 388 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 PMP22Q01453 160 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 PLCXD2Q0VAA5 305 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 NTRK2Q16620 822 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 MAPKAPK3Q16644 382 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 TIGD2Q4W5G0 525 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 DESI1Q6ICB0 168 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 MFSD12Q6NUT3 480 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 GALNTL5Q7Z4T8 443 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 FUNDC1Q8IVP5 155 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 CLEC4FQ8N1N0 589 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 CISD2Q8N5K1 135 aaKnown RBP13.9□□□□□ -0.18
CD9-210ENST00000543916 TMEM178AQ8NBL3 297 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 PSD4Q8NDX1 1056 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 FAM13CQ8NE31 585 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 OR10G3Q8NGC4 313 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 OR4N2Q8NGD1 307 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 OR5M3Q8NGP4 307 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 FBXO30Q8TB52 745 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 SFXN5Q8TD22 340 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 HOXB13Q92826 284 aaPredicted RBP13.9□□□□□ -0.18
CD9-210ENST00000543916 TMEM125Q96AQ2 219 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 OMA1Q96E52 524 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 CHMP6Q96FZ7 201 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 C16orf58Q96GQ5 468 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 CCDC115Q96NT0 180 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 OR52E6Q96RD3 313 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 TAAR6Q96RI8 345 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 LMF2Q9BU23 707 aaKnown RBP13.9□□□□□ -0.18
CD9-210ENST00000543916 SH2D2AQ9NP31 389 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 TIMMDC1Q9NPL8 285 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 FAM53CQ9NYF3 392 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 BTNL2Q9UIR0 455 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 COL6A6A6NMZ7 2263 aa13.9□□□□□ -0.18
CD9-210ENST00000543916 A0A0G2JMM0 328 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 A0A1W2PPB8 328 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 A0A1W2PRS3 328 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 FAM234BA2RU67 622 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 KIR3DP1A8MWS1 328 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 G3V3Y1 287 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 PPM1BO75688 479 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 HMGN2P05204 90 aaKnown RBP13.89□□□□□ -0.19
CD9-210ENST00000543916 IL6P05231 212 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 ACP2P11117 423 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 LSP1P33241 339 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 ARFIP2P53365 341 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 GPR85P60893 370 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 GAB1Q13480 694 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 TP53BP2Q13625 1128 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 SQLEQ14534 574 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 INPP5JQ15735 1006 aaPredicted RBP13.89□□□□□ -0.19
CD9-210ENST00000543916 INAQ16352 499 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 SPDYE7PQ495Y7 208 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 EXOSC6Q5RKV6 272 aaKnown RBP13.89□□□□□ -0.19
CD9-210ENST00000543916 DND1Q8IYX4 353 aaKnown RBP13.89□□□□□ -0.19
CD9-210ENST00000543916 SLC34A3Q8N130 599 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 GOLM1Q8NBJ4 401 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 VPS37AQ8NEZ2 397 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 OR56A1Q8NGH5 318 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 TMBIM1Q969X1 311 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 VPS33AQ96AX1 596 aa13.89□□□□□ -0.19
CD9-210ENST00000543916 SNRNP40Q96DI7 357 aaKnown RBP13.89□□□□□ -0.19
CD9-210ENST00000543916 OTUB1Q96FW1 271 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms