RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 C6orf120Q7Z4R8 191 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 WDR53Q7Z5U6 358 aaPredicted RBP5.84□□□□□ -1.47
LTBR-212ENST00000543542 GPALPP1Q8IXQ4 340 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 SLC34A3Q8N130 599 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 CLEC4FQ8N1N0 589 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 OR2L13Q8N349 312 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 CPSF7Q8N684 471 aaKnown RBP5.84□□□□□ -1.47
LTBR-212ENST00000543542 SLC15A4Q8N697 577 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 COX18Q8N8Q8 333 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 CDRT4Q8N9R6 151 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 TMEM178AQ8NBL3 297 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 CATSPER1Q8NEC5 780 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 SFXN5Q8TD22 340 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 ADAMTS15Q8TE58 950 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 C10orf82Q8WW14 230 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 HAS2Q92819 552 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 OMA1Q96E52 524 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 FAM120BQ96EK7 910 aaKnown RBP5.84□□□□□ -1.47
LTBR-212ENST00000543542 HSPBAP1Q96EW2 488 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 OTUB1Q96FW1 271 aaPredicted RBP5.84□□□□□ -1.47
LTBR-212ENST00000543542 CCDC115Q96NT0 180 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 SIGLEC12Q96PQ1 595 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 NPAS2Q99743 824 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 SLC35A5Q9BS91 424 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 ACTRT3Q9BYD9 372 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 RNF32Q9H0A6 362 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 NXF5Q9H1B4 397 aaKnown RBP5.84□□□□□ -1.47
LTBR-212ENST00000543542 EPN3Q9H201 632 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 TIMMDC1Q9NPL8 285 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 LEF1Q9UJU2 399 aaPredicted RBP5.84□□□□□ -1.47
LTBR-212ENST00000543542 B3GNT3Q9Y2A9 372 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 DTX4Q9Y2E6 619 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 NDUFAF1Q9Y375 327 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 NPFFR2Q9Y5X5 522 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 CAPN7Q9Y6W3 813 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 LOC400499M0QZD8 3231 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 ITPR1Q14643 2758 aa5.84□□□□□ -1.48
LTBR-212ENST00000543542 MGAQ8IWI9 3026 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 DOCK10Q96BY6 2186 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 MED13Q9UHV7 2174 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 LOC100653049A0A140TA62 436 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 TMEM200CA6NKL6 621 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 TTLL8A6PVC2 850 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 KLRC4-KLRK1H3BQV0 150 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 CDK2AP1O14519 115 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 ACOX3O15254 700 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 SNX3O60493 162 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 SLC25A12O75746 678 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 DCTN3O75935 186 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 KRT34O76011 436 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 KRT75O95678 551 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 HMGN2P05204 90 aaKnown RBP5.83□□□□□ -1.48
LTBR-212ENST00000543542 SP1P08047 785 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 IFI6P09912 130 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 ATP6V1C1P21283 382 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 DRD5P21918 477 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 ABCD3P28288 659 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 CDKN2CP42773 168 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 CD97P48960 835 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 MRPL19P49406 292 aaKnown RBP5.83□□□□□ -1.48
LTBR-212ENST00000543542 CLK3P49761 638 aaKnown RBP5.83□□□□□ -1.48
LTBR-212ENST00000543542 KHKP50053 298 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 TNFSF10P50591 281 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 PSMD4P55036 377 aaKnown RBP5.83□□□□□ -1.48
LTBR-212ENST00000543542 CASP9P55211 416 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 FBXW4P57775 412 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 PSPHP78330 225 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 PHC1P78364 1004 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 POU6F2P78424 691 aaPredicted RBP5.83□□□□□ -1.48
LTBR-212ENST00000543542 MRPS22P82650 360 aaKnown RBP5.83□□□□□ -1.48
LTBR-212ENST00000543542 HPCAP84074 193 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 PLGLB1Q02325 96 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 KLF10Q13118 480 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 DUSP8Q13202 625 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 RCAN2Q14206 197 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 DECR1Q16698 335 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 ZNF766Q5HY98 468 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 ATAD3BQ5T9A4 648 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 ZNF468Q5VIY5 522 aaPredicted RBP5.83□□□□□ -1.48
LTBR-212ENST00000543542 SPINK14Q6IE38 97 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 SLC25A25Q6KCM7 469 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 MFSD12Q6NUT3 480 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 CDC73Q6P1J9 531 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 ZCCHC12Q6PEW1 402 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 BLOC1S3Q6QNY0 202 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 IGFL2Q6UWQ7 119 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 IGFL3Q6UXB1 125 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 RTL4Q6ZR62 310 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 C16orf62Q7Z3J2 963 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 GALNTL5Q7Z4T8 443 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 MTDHQ86UE4 582 aaKnown RBP5.83□□□□□ -1.48
LTBR-212ENST00000543542 FUNDC1Q8IVP5 155 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 DND1Q8IYX4 353 aaKnown RBP5.83□□□□□ -1.48
LTBR-212ENST00000543542 RBMXL3Q8N7X1 1067 aaKnown RBP5.83□□□□□ -1.48
LTBR-212ENST00000543542 LSM14AQ8ND56 463 aaKnown RBP5.83□□□□□ -1.48
LTBR-212ENST00000543542 C17orf47Q8NEP4 570 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 PNPT1Q8TCS8 783 aaKnown RBP5.83□□□□□ -1.48
LTBR-212ENST00000543542 PIK3R3Q92569 461 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 DIO2Q92813 273 aa5.83□□□□□ -1.48
LTBR-212ENST00000543542 CDS1Q92903 461 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms