RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 RDH14Q9HBH5 336 aa18.39■□□□□ 0.54
SUDS3-204ENST00000543473 GSKIPQ9P0R6 139 aa18.39■□□□□ 0.54
SUDS3-204ENST00000543473 CORINQ9Y5Q5 1042 aa18.39■□□□□ 0.54
SUDS3-204ENST00000543473 FAM155AB1AL88 458 aaPredicted RBP18.39■□□□□ 0.53
SUDS3-204ENST00000543473 M0R3H8 397 aa18.39■□□□□ 0.53
SUDS3-204ENST00000543473 KAT7O95251 611 aa18.39■□□□□ 0.53
SUDS3-204ENST00000543473 KCNC1P48547 511 aa18.39■□□□□ 0.53
SUDS3-204ENST00000543473 GALEQ14376 348 aa18.39■□□□□ 0.53
SUDS3-204ENST00000543473 NXPE4Q6UWF7 544 aa18.39■□□□□ 0.53
SUDS3-204ENST00000543473 IL17FQ96PD4 163 aa18.39■□□□□ 0.53
SUDS3-204ENST00000543473 WASH4PA8MWX3 477 aa18.39■□□□□ 0.53
SUDS3-204ENST00000543473 IL12BP29460 328 aa18.39■□□□□ 0.53
SUDS3-204ENST00000543473 CDK10Q15131 360 aa18.39■□□□□ 0.53
SUDS3-204ENST00000543473 OR56A3Q8NH54 315 aa18.39■□□□□ 0.53
SUDS3-204ENST00000543473 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.39■□□□□ 0.532e-8■■■□□ 19.1
SUDS3-204ENST00000543473 OVCA2Q8WZ82 227 aa18.39■□□□□ 0.53
SUDS3-204ENST00000543473 KLHL9Q9P2J3 617 aa18.39■□□□□ 0.53
SUDS3-204ENST00000543473 AP1M2Q9Y6Q5 423 aa18.39■□□□□ 0.53
SUDS3-204ENST00000543473 ZNF705EA8MWA4 302 aaPredicted RBP18.39■□□□□ 0.53
SUDS3-204ENST00000543473 RNASET2O00584 256 aaKnown RBP18.39■□□□□ 0.53
SUDS3-204ENST00000543473 CXCR1P25024 350 aa18.39■□□□□ 0.53
SUDS3-204ENST00000543473 ACTR1BP42025 376 aa18.39■□□□□ 0.53
SUDS3-204ENST00000543473 ACTR1AP61163 376 aa18.39■□□□□ 0.53
SUDS3-204ENST00000543473 CLLU1OSQ5K130 101 aa18.39■□□□□ 0.53
SUDS3-204ENST00000543473 TRAM1L1Q8N609 369 aa18.39■□□□□ 0.53
SUDS3-204ENST00000543473 DNAJC5GQ8N7S2 189 aa18.39■□□□□ 0.53
SUDS3-204ENST00000543473 KHSRPQ92945 711 aaKnown RBP eCLIP18.39■□□□□ 0.535e-7■■■□□ 15.8
SUDS3-204ENST00000543473 UHRF1Q96T88 793 aaPredicted RBP18.39■□□□□ 0.53
SUDS3-204ENST00000543473 OR2S2Q9NQN1 319 aa18.39■□□□□ 0.53
SUDS3-204ENST00000543473 EMC8O43402 210 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 LIPAP38571 399 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 METTL11BQ5VVY1 283 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 NADSYN1Q6IA69 706 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 FBXO46Q6PJ61 603 aaPredicted RBP18.38■□□□□ 0.53
SUDS3-204ENST00000543473 CAMKVQ8NCB2 501 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 FBXO15Q8NCQ5 510 aaPredicted RBP18.38■□□□□ 0.53
SUDS3-204ENST00000543473 BADQ92934 168 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 ZNF285Q96NJ3 590 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 PAK4O96013 591 aaPredicted RBP18.38■□□□□ 0.53
SUDS3-204ENST00000543473 NPR2P20594 1047 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 ARRB2P32121 409 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 ISL1P61371 349 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 LMAN2Q12907 356 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 ZIC5Q96T25 663 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 AIFM2Q9BRQ8 373 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 PPA2Q9H2U2 334 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 PCDHGA2Q9Y5H1 932 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 MYO5AQ9Y4I1 1855 aaKnown RBP18.38■□□□□ 0.53
SUDS3-204ENST00000543473 UBXN7O94888 489 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 ALDOBP05062 364 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 UCHL1P09936 223 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 ZNF91Q05481 1191 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 ABCA11PQ4W5N1 156 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 FAM205BPQ63HN1 556 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 NRMQ8IXM6 262 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 HDDC3Q8N4P3 179 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 CNOT9Q92600 299 aaKnown RBP18.38■□□□□ 0.53
SUDS3-204ENST00000543473 HRASLS5Q96KN8 279 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 TEX37Q96LM6 180 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 EMC3Q9P0I2 261 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 GABRR3A8MPY1 467 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 GKN3PP0CG01 181 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 SSTR2P30874 369 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 WDR5P61964 334 aaKnown RBP18.38■□□□□ 0.53
SUDS3-204ENST00000543473 RAB40BQ12829 278 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 CEP68Q76N32 757 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 CPOQ8IVL8 374 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 OR6N2Q8NGY6 317 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 CARS2Q9HA77 564 aaKnown RBP18.38■□□□□ 0.53
SUDS3-204ENST00000543473 Q9N2J8 555 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 A3GALT2U3KPV4 340 aa18.38■□□□□ 0.53
SUDS3-204ENST00000543473 NRAPQ86VF7 1730 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 ZNF840PA6NDX5 716 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 UGDHO60701 494 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 LEFTY1O75610 366 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 PMEPA1Q969W9 287 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 CIDECQ96AQ7 238 aaPredicted RBP18.37■□□□□ 0.53
SUDS3-204ENST00000543473 DUS3LQ96G46 650 aaKnown RBP18.37■□□□□ 0.53
SUDS3-204ENST00000543473 ZNF700Q9H0M5 742 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 KCNK6Q9Y257 313 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 GPR39O43194 453 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 ACTA2P62736 377 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 ACTG2P63267 376 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 RASGEF1BQ0VAM2 473 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 USF2Q15853 346 aaPredicted RBP18.37■□□□□ 0.53
SUDS3-204ENST00000543473 FAM86B1Q8N7N1 296 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 ERVK-19Q9WJR5 959 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 A0A1B0GVC2 190 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 A6NIN4 97 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 PCDHGA12O60330 932 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 ATXN1LP0C7T5 689 aaKnown RBP18.37■□□□□ 0.53
SUDS3-204ENST00000543473 ZNF14P17017 642 aaPredicted RBP18.37■□□□□ 0.53
SUDS3-204ENST00000543473 ART1P52961 327 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 RAB5BP61020 215 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 ID2Q02363 134 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 POU4F2Q12837 409 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 MAP4K2Q12851 820 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 GAS6Q14393 721 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 GLT8D1Q68CQ7 371 aa18.37■□□□□ 0.53
SUDS3-204ENST00000543473 TTC9BQ8N6N2 239 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 269.2 ms