RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 ADGRD2Q7Z7M1 963 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 PARP8Q8N3A8 854 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 TMEM178AQ8NBL3 297 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 OR5T2Q8NGG2 359 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 OR6S1Q8NH40 331 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 OR1L3Q8NH93 324 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 OLIG1Q8TAK6 271 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 GOLGA5Q8TBA6 731 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 RDH11Q8TC12 318 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 CHPT1Q8WUD6 406 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 APOBEC4Q8WW27 367 aaKnown RBP3.69□□□□□ -1.82
SNHG1-217ENST00000541578 SHC3Q92529 594 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 DYRK2Q92630 601 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 CASP10Q92851 521 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 DEFB118Q96PH6 123 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 PIGQQ9BRB3 760 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 TDRD1Q9BXT4 1180 aaKnown RBP3.69□□□□□ -1.82
SNHG1-217ENST00000541578 GSDMCQ9BYG8 508 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 THAP2Q9H0W7 228 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 MMP28Q9H239 520 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 FAM124BQ9H5Z6 455 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-217ENST00000541578 WDR76Q9H967 626 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 KCNK13Q9HB14 408 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 ATAD3AQ9NVI7 634 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 RBM28Q9NW13 759 aaKnown RBP3.69□□□□□ -1.82
SNHG1-217ENST00000541578 EXTL2Q9UBQ6 330 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 HPCAL4Q9UM19 191 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 PPP2R2CQ9Y2T4 447 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 ATG4BQ9Y4P1 393 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 KIF16BQ96L93 1317 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 STK36Q9NRP7 1315 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 ANKRD36CQ5JPF3 1778 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 SCN7AQ01118 1682 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 MKI67P46013 3256 aaKnown RBP3.68□□□□□ -1.82
SNHG1-217ENST00000541578 MTMR11A4FU01 709 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 FAM172BPA6NC97 362 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 CHADO15335 359 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 CSO75390 466 aaKnown RBP3.68□□□□□ -1.82
SNHG1-217ENST00000541578 SEC24AO95486 1093 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 ANP32DO95626 131 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 TXNDC12O95881 172 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 CLPTM1O96005 669 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 NGFP01138 241 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 OPN1MWP04001 364 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 KRT8P05787 483 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 FRMD6-AS1P0C7T7 363 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 OPN1MW2P0DN77 364 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 OPN1MW3P0DN78 364 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 CEACAM1P13688 526 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 GP9P14770 177 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 GPX3P22352 226 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 OR3A2P47893 321 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 ACTR1AP61163 376 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 NOP14P78316 857 aaKnown RBP3.68□□□□□ -1.82
SNHG1-217ENST00000541578 SNTB2Q13425 540 aaKnown RBP3.68□□□□□ -1.82
SNHG1-217ENST00000541578 GCKRQ14397 625 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 MEF2DQ14814 521 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 CEP55Q53EZ4 464 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 PLPP4Q5VZY2 271 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 ZNF730Q6ZMV8 503 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 ERASQ7Z444 233 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 GOLGA7Q7Z5G4 137 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 TRPT1Q86TN4 253 aaKnown RBP3.68□□□□□ -1.82
SNHG1-217ENST00000541578 GPBP1Q86WP2 473 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 FADS6Q8N9I5 356 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 MINDY2Q8NBR6 621 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 STKLD1Q8NE28 680 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 RPLP0P6Q8NHW5 317 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 MAPK15Q8TD08 544 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 ZNRF4Q8WWF5 429 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 HPSE2Q8WWQ2 592 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 SENP5Q96HI0 755 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-217ENST00000541578 PCED1BQ96HM7 432 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 WRAP53Q9BUR4 548 aaKnown RBP3.68□□□□□ -1.82
SNHG1-217ENST00000541578 TMEM117Q9H0C3 514 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 SIX2Q9NPC8 291 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 GDAP2Q9NXN4 497 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 SLC9A8Q9Y2E8 581 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 USP16Q9Y5T5 823 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 FKBP7Q9Y680 259 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 ZHX2Q9Y6X8 837 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 RIC1Q4ADV7 1423 aa3.68□□□□□ -1.82
SNHG1-217ENST00000541578 CENPFP49454 3210 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 IBTKQ9P2D0 1353 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-217ENST00000541578 KDM3BQ7LBC6 1761 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 C15orf38-AP3S2A0A0A6YYH1 394 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 P2RY10O00398 339 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 PDXKO00764 312 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 SURF4O15260 269 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 KIAA0754O94854 1291 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 SNX4O95219 450 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 PRAMEF12O95522 483 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 FGF19O95750 216 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 EML2O95834 649 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 CSF2P04141 144 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 RPLP0P05388 317 aaKnown RBP3.67□□□□□ -1.82
SNHG1-217ENST00000541578 UGT2B4P06133 528 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 ASNSP08243 561 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 RPA2P15927 270 aa3.67□□□□□ -1.82
SNHG1-217ENST00000541578 C4BPBP20851 252 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms