RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 CCNL2Q96S94 520 aaPredicted RBP5.1□□□□□ -1.59
DDB1-219ENST00000541513 CCT8L2Q96SF2 557 aa5.1□□□□□ -1.59
DDB1-219ENST00000541513 PRMT1Q99873 361 aaKnown RBP5.1□□□□□ -1.59
DDB1-219ENST00000541513 SPATA25Q9BR10 227 aa5.1□□□□□ -1.59
DDB1-219ENST00000541513 AIFM2Q9BRQ8 373 aa5.1□□□□□ -1.59
DDB1-219ENST00000541513 BTBD10Q9BSF8 475 aa5.1□□□□□ -1.59
DDB1-219ENST00000541513 TEKT3Q9BXF9 490 aa5.1□□□□□ -1.59
DDB1-219ENST00000541513 FSD1LQ9BXM9 530 aa5.1□□□□□ -1.59
DDB1-219ENST00000541513 SLC2A11Q9BYW1 496 aa5.1□□□□□ -1.59
DDB1-219ENST00000541513 WWP1Q9H0M0 922 aa5.1□□□□□ -1.59
DDB1-219ENST00000541513 PPP1R3EQ9H7J1 279 aa5.1□□□□□ -1.59
DDB1-219ENST00000541513 Q9H8V8 135 aa5.1□□□□□ -1.59
DDB1-219ENST00000541513 MRM3Q9HC36 420 aaKnown RBP5.1□□□□□ -1.59
DDB1-219ENST00000541513 RAB9BQ9NP90 201 aa5.1□□□□□ -1.59
DDB1-219ENST00000541513 GSN-AS1Q9NRJ2 163 aa5.1□□□□□ -1.59
DDB1-219ENST00000541513 OSER1Q9NX31 292 aa5.1□□□□□ -1.59
DDB1-219ENST00000541513 IL37Q9NZH6 218 aa5.1□□□□□ -1.59
DDB1-219ENST00000541513 C1RLQ9NZP8 487 aa5.1□□□□□ -1.59
DDB1-219ENST00000541513 HACD3Q9P035 362 aa5.1□□□□□ -1.59
DDB1-219ENST00000541513 RCC2Q9P258 522 aaKnown RBP5.1□□□□□ -1.59
DDB1-219ENST00000541513 SLC9A2Q9UBY0 812 aa5.1□□□□□ -1.59
DDB1-219ENST00000541513 ZNF639Q9UID6 485 aa5.1□□□□□ -1.59
DDB1-219ENST00000541513 STAP1Q9ULZ2 295 aa5.1□□□□□ -1.59
DDB1-219ENST00000541513 ERVK-19Q9WJR5 959 aa5.1□□□□□ -1.59
DDB1-219ENST00000541513 RUVBL2Q9Y230 463 aaKnown RBP5.1□□□□□ -1.59
DDB1-219ENST00000541513 LRP12Q9Y561 859 aa5.1□□□□□ -1.59
DDB1-219ENST00000541513 HEMK1Q9Y5R4 338 aaPredicted RBP5.1□□□□□ -1.59
DDB1-219ENST00000541513 TNRC18O15417 2968 aaPredicted RBP5.09□□□□□ -1.59
DDB1-219ENST00000541513 ELP1O95163 1332 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 TRGV11A0A075B6L2 103 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 GSTTP1A0A1W2PQM5 241 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 CCDC162PA2VCL2 907 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 METTL21EPA6NDL7 271 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 CXorf65A6NEN9 183 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 CASTOR2A6NHX0 329 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 C9orf118A6NHY6 69 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 TMEM189-UBE2V1I3L0A0 370 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 LAD1O00515 517 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 TLX3O43711 291 aaPredicted RBP5.09□□□□□ -1.59
DDB1-219ENST00000541513 IDH3BO43837 385 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 LDB3O75112 727 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 GMNNO75496 209 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 ERLIN2O94905 339 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 NDUFB4O95168 129 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 PGK1P00558 417 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 MMP3P08254 477 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 CCNB1P14635 433 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 TPSB2P20231 275 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 NT5EP21589 574 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 BMP5P22003 454 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 PCSK6P29122 969 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 APOBEC1P41238 236 aaKnown RBP5.09□□□□□ -1.59
DDB1-219ENST00000541513 GLIPR1P48060 266 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 CCT3P49368 545 aaKnown RBP5.09□□□□□ -1.59
DDB1-219ENST00000541513 GDI2P50395 445 aaKnown RBP5.09□□□□□ -1.59
DDB1-219ENST00000541513 ARHGDIAP52565 204 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 THOP1P52888 689 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 NLRP11P59045 1033 aaKnown RBP5.09□□□□□ -1.59
DDB1-219ENST00000541513 HERV-K104P63124 156 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 ENPEPQ07075 957 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 ZFP36L1Q07352 338 aaKnown RBP5.09□□□□□ -1.59
DDB1-219ENST00000541513 FAM27E3Q08E93 113 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 UBE2V1Q13404 147 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 SPCS2Q15005 226 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 TPSAB1Q15661 275 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 RBBP7Q16576 425 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 CALCRLQ16602 461 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 ITPRIPL2Q3MIP1 535 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 ZNF528Q3MIS6 628 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 HSDL1Q3SXM5 330 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 PDCD4Q53EL6 469 aaKnown RBP5.09□□□□□ -1.59
DDB1-219ENST00000541513 ZC2HC1CQ53FD0 456 aaPredicted RBP5.09□□□□□ -1.59
DDB1-219ENST00000541513 SYT14P1Q58G82 188 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 RNASE12Q5GAN4 147 aaKnown RBP5.09□□□□□ -1.59
DDB1-219ENST00000541513 C6orf226Q5I0X4 101 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 PCID2Q5JVF3 399 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 C1QL3Q5VWW1 255 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 FRG2Q64ET8 278 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 PTRHD1Q6GMV3 140 aaKnown RBP5.09□□□□□ -1.59
DDB1-219ENST00000541513 TPGS1Q6ZTW0 290 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 FJX1Q86VR8 437 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 SFTPA2Q8IWL1 248 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 EMC1Q8N766 993 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 GATSQ8NAP1 163 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 ABHD11Q8NFV4 315 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 ZNF596Q8TC21 504 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 GRHL3Q8TE85 626 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 SLCO2A1Q92959 643 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 PYCR2Q96C36 320 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 MBD6Q96DN6 1003 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 TMEM175Q9BSA9 504 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 GANQ9H2C0 597 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 SMYD3Q9H7B4 428 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 ELOVL3Q9HB03 270 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 C8orf4Q9NR00 106 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 HIF1ANQ9NWT6 349 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 SPHK1Q9NYA1 384 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 CISD1Q9NZ45 108 aaKnown RBP5.09□□□□□ -1.59
DDB1-219ENST00000541513 SMARCAL1Q9NZC9 954 aa5.09□□□□□ -1.59
DDB1-219ENST00000541513 KLHL13Q9P2N7 655 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms