RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 CTDSP2O14595 271 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 ZNF821O75541 412 aaPredicted RBP9.83□□□□□ -0.84
CHFR-219ENST00000541341 RFPL3O75679 317 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 VIPP01282 170 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 HLA-DPB1P04440 258 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 SLC2A2P11168 524 aaPredicted RBP9.83□□□□□ -0.84
CHFR-219ENST00000541341 CD53P19397 219 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 SERPINA4P29622 427 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 LIMS1P48059 325 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 STK19P49842 368 aaPredicted RBP9.83□□□□□ -0.84
CHFR-219ENST00000541341 NKX2-5P52952 324 aaPredicted RBP9.83□□□□□ -0.84
CHFR-219ENST00000541341 CDH12P55289 794 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 RRAS2P62070 204 aaPredicted RBP9.83□□□□□ -0.84
CHFR-219ENST00000541341 CDK6Q00534 326 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 RAB40BQ12829 278 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 HYAL2Q12891 473 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 PPP1R8Q12972 351 aaKnown RBP9.83□□□□□ -0.84
CHFR-219ENST00000541341 SCARB2Q14108 478 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 IHHQ14623 411 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 GTDC1Q4AE62 458 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 CCDC58Q4VC31 144 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 DCST1Q5T197 706 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 DHRS13Q6UX07 377 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 BAIAP2L2Q6UXY1 529 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 DPY19L3Q6ZPD9 716 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 VTCN1Q7Z7D3 282 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 SLC51BQ86UW2 128 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 SLC34A3Q8N130 599 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 PIH1D2Q8WWB5 315 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 ASZ1Q8WWH4 475 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 DEDD2Q8WXF8 326 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 ASB11Q8WXH4 323 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 UFD1Q92890 307 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 FOPNLQ96NB1 174 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 ZNF607Q96SK3 696 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 SDHCQ99643 169 aaPredicted RBP9.83□□□□□ -0.84
CHFR-219ENST00000541341 MARVELD1Q9BSK0 173 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 POLDIP3Q9BY77 421 aaKnown RBP9.83□□□□□ -0.84
CHFR-219ENST00000541341 ZDHHC5Q9C0B5 715 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 KCNN2Q9H2S1 579 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 CLEC4MQ9H2X3 399 aaPredicted RBP9.83□□□□□ -0.84
CHFR-219ENST00000541341 UTS2RQ9UKP6 389 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 DLGAP4Q9Y2H0 992 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 ASB1Q9Y576 335 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 DSPPQ9NZW4 1301 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 SMG1Q96Q15 3661 aaKnown RBP9.82□□□□□ -0.84
CHFR-219ENST00000541341 IGSF10Q6WRI0 2623 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 A0A1B0GW55 424 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 A0A1W2PQ72 361 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 TRABD2BA6NFA1 517 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 GFYI3L273 518 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 FOXE1O00358 373 aaPredicted RBP9.82□□□□□ -0.84
CHFR-219ENST00000541341 SLC28A2O43868 658 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 GPX5O75715 221 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 SEMA4FO95754 770 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 IGSF6O95976 241 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 CATP04040 527 aaKnown RBP9.82□□□□□ -0.84
CHFR-219ENST00000541341 PRB1P04280 392 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 ANXA4P09525 319 aaPredicted RBP9.82□□□□□ -0.84
CHFR-219ENST00000541341 MSL3P1P0C860 447 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 DUX4L2P0CJ85 424 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 DUX4L3P0CJ86 424 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 DUX4L4P0CJ87 422 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 DUX4L5P0CJ88 424 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 DUX4L6P0CJ89 424 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 DUX4L7P0CJ90 424 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 ALAS2P22557 587 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 GABRA5P31644 462 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 RPS19P39019 145 aaKnown RBP9.82□□□□□ -0.84
CHFR-219ENST00000541341 NNMTP40261 264 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 HTR2BP41595 481 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 CDKN2CP42773 168 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 CRATP43155 626 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 RFX2P48378 723 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 CLDN20P56880 219 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 POLR2LP62875 67 aaKnown RBP9.82□□□□□ -0.84
CHFR-219ENST00000541341 DAB2P98082 770 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 GALK2Q01415 458 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 BDH1Q02338 343 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 ACSM1Q08AH1 577 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 CNTN1Q12860 1018 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 CHIT1Q13231 466 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 TPBGQ13641 420 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 UGT8Q16880 541 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 EXOC3L2Q2M3D2 409 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 HNRNPA1L2Q32P51 320 aaKnown RBP9.82□□□□□ -0.84
CHFR-219ENST00000541341 C12orf73Q69YU5 71 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 REEP3Q6NUK4 255 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 C22orf39Q6P5X5 142 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 LINGO4Q6UY18 593 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 USP45Q70EL2 814 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 ASPGQ86U10 573 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 ANKRD46Q86W74 232 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 KIF18BQ86Y91 864 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 RAVER1Q8IY67 606 aaKnown RBP9.82□□□□□ -0.84
CHFR-219ENST00000541341 DCBLD1Q8N8Z6 715 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 CADM4Q8NFZ8 388 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 C1orf216Q8TAB5 229 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 UBASH3BQ8TF42 649 aa9.82□□□□□ -0.84
CHFR-219ENST00000541341 VOPP1Q96AW1 172 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms