RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 ABRACLQ9P1F3 81 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 PCDHA9Q9Y5H5 950 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 ARFGEF2Q9Y6D5 1785 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 SIGLEC1Q9BZZ2 1709 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 WASHC1A8K0Z3 465 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 ARPC1BO15143 372 aaKnown RBP14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 TAZQ16635 292 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 GALNT10Q86SR1 603 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 CLDN22Q8N7P3 220 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 KREMEN2Q8NCW0 462 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 HERVK_113Q902F9 699 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 TREX2Q9BQ50 279 aaPredicted RBP14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 DPEP2Q9H4A9 486 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 RBFOX1Q9NWB1 397 aaKnown RBP14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 CLEC4EQ9ULY5 219 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 LOC105369274A0A096LPK9 316 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 TTC34A8MYJ7 566 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 CASC3O15234 703 aaKnown RBP14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 SLC43A1O75387 559 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 NUDT7P0C024 238 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 RPL10P27635 214 aaKnown RBP14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 FLT3LGP49771 235 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 TUBB3Q13509 450 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 PCGF3Q3KNV8 242 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 CLEC14AQ86T13 490 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 OR4N4Q8N0Y3 316 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 OR5W2Q8NH69 310 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 BRIX1Q8TDN6 353 aaKnown RBP14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 GLYATL1Q969I3 302 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 SLC38A3Q99624 504 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 CMKLR1Q99788 373 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 VRK1Q99986 396 aaPredicted RBP14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 TREX1Q9NSU2 369 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 MTMR11A4FU01 709 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 WASP42768 502 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 PROKR1Q8TCW9 393 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 APIPQ96GX9 242 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 LRIG1Q96JA1 1093 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 PCYT2Q99447 389 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 VNN3Q9NY84 501 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 PRODH2Q9UF12 536 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 NAALAD2Q9Y3Q0 740 aa14.23□□□□□ -0.13
SMARCA4-207ENST00000541122 LOC102723532A0A0G2JNH3 316 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 ZBTB48P10074 688 aaPredicted RBP14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 GPR4P46093 362 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 CDKN1CP49918 316 aaPredicted RBP14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 TAS2R38P59533 333 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 CD200R1Q8TD46 325 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 IGSF8Q969P0 613 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 ZNF689Q96CS4 500 aaPredicted RBP14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 FAM46AQ96IP4 442 aaKnown RBP14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 POU2F3Q9UKI9 436 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 CTDSP2O14595 271 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 TSPAN6O43657 245 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 ICMTO60725 284 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 AKAIN1P0CW23 69 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 TYRP14679 529 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 ETV6P41212 452 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 MEF2AQ02078 507 aaPredicted RBP14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 DNAJC22Q8N4W6 341 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 OR56B4Q8NH76 319 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 MAL2Q969L2 176 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 FCRL1Q96LA6 429 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 SULT4A1Q9BR01 284 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 NTMT1Q9BV86 223 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 C20orf27Q9GZN8 174 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 CLMPQ9H6B4 373 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 B3GAT2Q9NPZ5 323 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 HEMK1Q9Y5R4 338 aaPredicted RBP14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 RNF13O43567 381 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 H2BFMP0C1H6 154 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 ZNF8P17098 575 aaPredicted RBP14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 RIDAP52758 137 aaKnown RBP14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 RRAS2P62070 204 aaPredicted RBP14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 OXA1LQ15070 435 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 RAB6CQ53S08 254 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 SYT6Q5T7P8 510 aaPredicted RBP14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 SPATC1Q76KD6 591 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 IQCF1Q8N6M8 205 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 RAB6CQ9H0N0 254 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 PNO1Q9NRX1 252 aaKnown RBP14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 ANKRD33BA6NCL7 494 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 RHPN2P1A8MT19 583 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 C2orf74A8MZ97 194 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 LSSP48449 732 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 ETV1P50549 477 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 MPP7Q5T2T1 576 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 RETREG3Q86VR2 466 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 PTRH1Q86Y79 214 aaKnown RBP14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 LYSMD2Q8IV50 215 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 LRRC25Q8N386 305 aaPredicted RBP14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 SMAP2Q8WU79 429 aaPredicted RBP14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 ARL5BQ96KC2 179 aa14.22□□□□□ -0.13
SMARCA4-207ENST00000541122 H7BY64 318 aa14.21□□□□□ -0.13
SMARCA4-207ENST00000541122 SLC16A6O15403 523 aa14.21□□□□□ -0.13
SMARCA4-207ENST00000541122 SLC31A1O15431 190 aa14.21□□□□□ -0.13
SMARCA4-207ENST00000541122 HPGDSO60760 199 aa14.21□□□□□ -0.13
SMARCA4-207ENST00000541122 ALX3O95076 343 aa14.21□□□□□ -0.13
SMARCA4-207ENST00000541122 LATS1O95835 1130 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms