RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 ACTL7AQ9Y615 435 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 AP1M2Q9Y6Q5 423 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 COLEC10Q9Y6Z7 277 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 A0A1W2PQL4 384 aaPredicted RBP4.96□□□□□ -1.62
PROM1-220ENST00000540805 C2orf78A6NCI8 922 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 ZNF98A6NK75 572 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 DRGXA6NNA5 263 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 PRR23D1E9PI22 279 aaPredicted RBP4.96□□□□□ -1.62
PROM1-220ENST00000540805 LEFTY2O00292 366 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 MYL12BO14950 172 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 PLA2G10O15496 165 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 ADAM12O43184 909 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 GPR39O43194 453 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 SEC14L5O43304 696 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 PROM1O43490 865 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 HCN1O60741 890 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 CSO75390 466 aaKnown RBP4.96□□□□□ -1.62
PROM1-220ENST00000540805 KLF8O95600 359 aaPredicted RBP4.96□□□□□ -1.62
PROM1-220ENST00000540805 TRBC1P01850 177 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 PRR23D2P0DMB1 279 aaPredicted RBP4.96□□□□□ -1.62
PROM1-220ENST00000540805 PRKAR1AP10644 381 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 CKMT1AP12532 417 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 MYL12AP19105 171 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 PRPS1L1P21108 318 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 CRYBB2P43320 205 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 RGRP47804 291 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 CCT3P49368 545 aaKnown RBP4.96□□□□□ -1.62
PROM1-220ENST00000540805 BLKP51451 505 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 EPHA5P54756 1037 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 RPL6Q02878 288 aaKnown RBP4.96□□□□□ -1.62
PROM1-220ENST00000540805 CACNG1Q06432 222 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 HSPB3Q12988 150 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 FGFBP1Q14512 234 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 NCF4Q15080 339 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 IFI44LQ53G44 452 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 KHDRBS2Q5VWX1 349 aaKnown RBP4.96□□□□□ -1.62
PROM1-220ENST00000540805 SLC6A19Q695T7 634 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 LRFN4Q6PJG9 635 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 GDPD4Q6W3E5 623 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 COMMD7Q86VX2 200 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 MCEMP1Q8IX19 187 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 SLC34A3Q8N130 599 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 METTL27Q8N6F8 245 aaPredicted RBP4.96□□□□□ -1.62
PROM1-220ENST00000540805 IL22RA1Q8N6P7 574 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 OR2AP1Q8NGE2 309 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 OR4C15Q8NGM1 316 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 OR10Z1Q8NGY1 313 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 DOK4Q8TEW6 326 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 ST8SIA4Q92187 359 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 KLHL15Q96M94 604 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 YIPF4Q9BSR8 244 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 DPCDQ9BVM2 203 aaPredicted RBP4.96□□□□□ -1.62
PROM1-220ENST00000540805 LINC00597Q9H2U6 94 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 ELAC1Q9H777 363 aaKnown RBP4.96□□□□□ -1.62
PROM1-220ENST00000540805 IL23AQ9NPF7 189 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 DNAJC11Q9NVH1 559 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 MCUBQ9NWR8 336 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 HCFC1R1Q9NWW0 138 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 FAM120CQ9NX05 1096 aaKnown RBP4.96□□□□□ -1.62
PROM1-220ENST00000540805 MRPL39Q9NYK5 338 aaKnown RBP4.96□□□□□ -1.62
PROM1-220ENST00000540805 NDUFAF4Q9P032 175 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 FZD4Q9ULV1 537 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 CORO2BQ9UQ03 480 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 PCDHB11Q9Y5F2 797 aa4.96□□□□□ -1.62
PROM1-220ENST00000540805 SPEGQ15772 3267 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 FAM240BA0A1B0GVZ2 78 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 A8MVJ9 347 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 CLDN4O14493 209 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 TPST2O60704 377 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 B4GALT2O60909 372 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 AP2A2O94973 939 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 TGFB1P01137 390 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 IL1AP01583 271 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 OPN1SWP03999 348 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 ANXA4P09525 319 aaPredicted RBP4.95□□□□□ -1.62
PROM1-220ENST00000540805 NUDT7P0C024 238 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 SLC35G6P0C7Q6 338 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 POU2F1P14859 743 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 TNFRSF1BP20333 461 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 PPIBP23284 216 aaKnown RBP4.95□□□□□ -1.62
PROM1-220ENST00000540805 ITGB8P26012 769 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 PCGF2P35227 344 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 RRAS2P62070 204 aaPredicted RBP4.95□□□□□ -1.62
PROM1-220ENST00000540805 PTSQ03393 145 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 C1DQ13901 141 aaKnown RBP4.95□□□□□ -1.62
PROM1-220ENST00000540805 PTGES3Q15185 160 aaKnown RBP4.95□□□□□ -1.62
PROM1-220ENST00000540805 SPHARQ15513 63 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 CHRNA6Q15825 494 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 WSCD2Q2TBF2 565 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 GARNL3Q5VVW2 1013 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 TRIM40Q6P9F5 258 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 KLHL17Q6TDP4 642 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 HSDL2Q6YN16 418 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 CERS6Q6ZMG9 384 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 MBOAT1Q6ZNC8 495 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 GPR155Q7Z3F1 870 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 CLECL1Q8IZS7 167 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 GHDCQ8N2G8 530 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 ZNF248Q8NDW4 579 aa4.95□□□□□ -1.62
PROM1-220ENST00000540805 LKAAEAR1Q8TD35 194 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms