RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 SP1P08047 785 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 CT45A8P0DMV1 189 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 CT45A9P0DMV2 189 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 UQCRC2P22695 453 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 SOAT1P35610 550 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 PRIM2P49643 509 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 NNATQ16517 81 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 MAPKAPK3Q16644 382 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 ZNF791Q3KP31 576 aaPredicted RBP14.31□□□□□ -0.12
DDB1-218ENST00000540784 VPS26BQ4G0F5 336 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 CT45A2Q5DJT8 189 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 SLC6A19Q695T7 634 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 SLC25A25Q6KCM7 469 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 ZNF621Q6ZSS3 439 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 MSANTD1Q6ZTZ1 278 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 C6orf120Q7Z4R8 191 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 DND1Q8IYX4 353 aaKnown RBP14.31□□□□□ -0.12
DDB1-218ENST00000540784 CYP4Z2PQ8N1L4 340 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 CDRT4Q8N9R6 151 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 OR56A1Q8NGH5 318 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 SFXN5Q8TD22 340 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 C10orf82Q8WW14 230 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 VPS33AQ96AX1 596 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 C16orf58Q96GQ5 468 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 ITCHQ96J02 903 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 SGCZQ96LD1 299 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 C5orf34Q96MH7 638 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 BTBD9Q96Q07 612 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 ZNF385DQ9H6B1 395 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 EQTNQ9NQ60 294 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 OR10H1Q9Y4A9 318 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 CACNA1GO43497 2377 aa14.31□□□□□ -0.12
DDB1-218ENST00000540784 RFXANKO14593 260 aa14.3□□□□□ -0.12
DDB1-218ENST00000540784 TO15178 435 aa14.3□□□□□ -0.12
DDB1-218ENST00000540784 NEURL1O76050 574 aa14.3□□□□□ -0.12
DDB1-218ENST00000540784 HMGN2P05204 90 aaKnown RBP14.3□□□□□ -0.12
DDB1-218ENST00000540784 FBXO45P0C2W1 286 aa14.3□□□□□ -0.12
DDB1-218ENST00000540784 NAGAP17050 411 aa14.3□□□□□ -0.12
DDB1-218ENST00000540784 GABRA3P34903 492 aa14.3□□□□□ -0.12
DDB1-218ENST00000540784 CORO7P57737 925 aa14.3□□□□□ -0.12
DDB1-218ENST00000540784 PSPHP78330 225 aa14.3□□□□□ -0.12
DDB1-218ENST00000540784 GAB1Q13480 694 aa14.3□□□□□ -0.12
DDB1-218ENST00000540784 TP53BP2Q13625 1128 aa14.3□□□□□ -0.12
DDB1-218ENST00000540784 TIGD2Q4W5G0 525 aa14.3□□□□□ -0.12
DDB1-218ENST00000540784 ZNF766Q5HY98 468 aa14.3□□□□□ -0.12
DDB1-218ENST00000540784 RTL4Q6ZR62 310 aa14.3□□□□□ -0.12
DDB1-218ENST00000540784 ZNF227Q86WZ6 799 aa14.3□□□□□ -0.12
DDB1-218ENST00000540784 PRR22Q8IZ63 422 aa14.3□□□□□ -0.12
DDB1-218ENST00000540784 TRIML2Q8N7C3 387 aa14.3□□□□□ -0.12
DDB1-218ENST00000540784 MDS2Q8NDY4 140 aa14.3□□□□□ -0.12
DDB1-218ENST00000540784 OR5AK3PQ8NH89 298 aa14.3□□□□□ -0.12
DDB1-218ENST00000540784 GOT1L1Q8NHS2 421 aaPredicted RBP14.3□□□□□ -0.12
DDB1-218ENST00000540784 SLC9A6Q92581 669 aa14.3□□□□□ -0.12
DDB1-218ENST00000540784 SPDL1Q96EA4 605 aa14.3□□□□□ -0.12
DDB1-218ENST00000540784 MS4A4EQ96PG1 132 aa14.3□□□□□ -0.12
DDB1-218ENST00000540784 YIPF4Q9BSR8 244 aa14.3□□□□□ -0.12
DDB1-218ENST00000540784 INPP5KQ9BT40 448 aa14.3□□□□□ -0.12
DDB1-218ENST00000540784 LMF2Q9BU23 707 aaKnown RBP14.3□□□□□ -0.12
DDB1-218ENST00000540784 EPN3Q9H201 632 aa14.3□□□□□ -0.12
DDB1-218ENST00000540784 TIMMDC1Q9NPL8 285 aa14.3□□□□□ -0.12
DDB1-218ENST00000540784 SAR1AQ9NR31 198 aa14.3□□□□□ -0.12
DDB1-218ENST00000540784 KLHL1Q9NR64 748 aa14.3□□□□□ -0.12
DDB1-218ENST00000540784 ANAPC2Q9UJX6 822 aa14.3□□□□□ -0.12
DDB1-218ENST00000540784 VPS4AQ9UN37 437 aa14.3□□□□□ -0.12
DDB1-218ENST00000540784 FAF1Q9UNN5 650 aaPredicted RBP14.3□□□□□ -0.12
DDB1-218ENST00000540784 TNRC6AQ8NDV7 1962 aaKnown RBP14.3□□□□□ -0.12
DDB1-218ENST00000540784 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 RNF103-CHMP3A0A140T963 221 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 NR5A2O00482 541 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 SNX3O60493 162 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 CCDC22O60826 627 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 REM1O75628 298 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 SLC25A12O75746 678 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 SOX30O94993 753 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 ANP32DO95626 131 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 GSNP06396 782 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 KRT16P08779 473 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 ALOX5P09917 674 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 ABCD3P28288 659 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 KRT20P35900 424 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 CHI3L1P36222 383 aaPredicted RBP14.29□□□□□ -0.12
DDB1-218ENST00000540784 TRPC1P48995 793 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 TMED10P49755 219 aaKnown RBP14.29□□□□□ -0.12
DDB1-218ENST00000540784 PSG6Q00889 435 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 RCAN2Q14206 197 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 CYP27C1Q4G0S4 372 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 COLEC12Q5KU26 742 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 SLC22A10Q63ZE4 541 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 MFSD12Q6NUT3 480 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 LYPD8Q6UX82 237 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 NPSR1Q6W5P4 371 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 NUP54Q7Z3B4 507 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 MDGA2Q7Z553 956 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 WDR53Q7Z5U6 358 aaPredicted RBP14.29□□□□□ -0.12
DDB1-218ENST00000540784 SLC34A3Q8N130 599 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 CLEC4FQ8N1N0 589 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 FAM13CQ8NE31 585 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 OR5M3Q8NGP4 307 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 GPR151Q8TDV0 419 aa14.29□□□□□ -0.12
DDB1-218ENST00000540784 SPACA9Q96E40 222 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms